DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8944 and CG12391

DIOPT Version :9

Sequence 1:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster
Sequence 2:NP_610639.1 Gene:CG12391 / 36170 FlyBaseID:FBgn0033581 Length:587 Species:Drosophila melanogaster


Alignment Length:673 Identity:127/673 - (18%)
Similarity:197/673 - (29%) Gaps:243/673 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 DAD-TALLE--------PQMVIKQELQDLPCSD---------DDVVAG---------EED----- 132
            :|| |.|.|        ||...:.:.|..|..|         ||.|:|         |:|     
  Fly     2 EADITPLAETNGEQRQNPQESAQNQEQPQPRQDLAGKSVGSADDGVSGTVGQIMDYLEDDAGATA 66

  Fly   133 DDEQRLNDSE------ADEDEAILPESDVPVVSSKTRARKK-VTKQRQRDMSSELLIAGDGDSSM 190
            |.:..:.::|      ..|||:..|:::......:..:.|| :.:...:|..|:.....||:...
  Fly    67 DQDAEMGEAEYLDGEMPQEDESETPQTEKANEGCQESSNKKDLQESAAKDDFSKEKSGEDGEKDT 131

  Fly   191 DDYGDPDHSYMDDN-----SGEYMDFAGFDGVN--HSGFGTE---------SDFLSYDEMVEESL 239
            |......|.:.|:|     .|:..|....|.|.  ....|||         .|.|..||...|.:
  Fly   132 DKEKKATHLHEDNNDDAEKDGDEADAEDEDDVEKPEDEDGTEEGDEAIEEDEDALDEDEDPNEEV 196

  Fly   240 --------LGRDREVTMHIKDRKMIQFLIHSYQRNPFLWDHGNAQFRDRVKRARFLDWIVLEFKS 296
                    .|.|.|..:...|..               .|..:...|:|.|.             
  Fly   197 EEIEPDFETGTDAEGELITGDEP---------------GDLADVPIRERKKE------------- 233

  Fly   297 RFNISLAKDAITRKWDNLRTVYKRECNRMALEKTNISTLWYFKELHFLNEVYSYNDKMSDAVVKE 361
                              ..|.:.:| |:...|..:..|  ||             |..||    
  Fly   234 ------------------EPVDEDQC-RVCTSKEELVCL--FK-------------KQIDA---- 260

  Fly   362 TSYRRRFSAIWNDTSTAKLLSMVKRYQCFYNRFDPDYRSKERRGEGLHQMAIELQQLIDVTTIQI 426
                         |....||.:..........|.|.:...:..|.  ..:||:|::.::.|..::
  Fly   261 -------------TPADMLLVICPNVSILPKDFMPQFICTKCMGS--LTIAIQLRKQLETTDQEL 310

  Fly   427 SKRISQLRFDYSKQKMER---------------LNSERLGKKF----IANYLYYDQMHFMDDD-- 470
            .||:|:     ||.|:.|               .:.:.|..:|    :|.....|......||  
  Fly   311 RKRLSR-----SKNKVRRPRGYVVIDAPVTDSSEDEDELDDEFKVSDVAGTTSADSDSADSDDSE 370

  Fly   471 ------------------------------------------IPPFKCAHCPEIVQTLRELDLHM 493
                                                      :.||:|.:|.......:...||.
  Fly   371 KEKKKPGPRGRPRKKPLKRGTDSDGEPSSAQKKKYQPSSTASVGPFECPNCDLTFSRKQSYVLHR 435

  Fly   494 LTHQPSLGGGYYCNICSIQFHNAQEFDNHKQLHLGGVTEIKFNCELCTASFREKANYDEHL-RRH 557
            .||:..   .:.|.||..:|.....:..|.|.|  ......|.||||...||.:|....|: :||
  Fly   436 KTHERI---EHACPICGKKFKVEWAYKTHMQRH--EQERAHFRCELCPKIFRLRAELKHHMAQRH 495

  Fly   558 NEELFL--------PSLALNHSIMEGGLG-----DDEIGVEGEESRGSGSRRKRRHAAKATDDMV 609
            :|..|:        ..|..........:|     :|.:.::.|:||.....|.:           
  Fly   496 DEHGFIYECKRCQRTFLTQQRLQRHQAVGCQRHKEDSVRIKEEQSRFKQESRSK----------- 549

  Fly   610 DDDDRIGGGGGGGSGGGGTDIAK 632
             ||...|........|.|.|:.|
  Fly   550 -DDRHHGNNSSKRRPGEGRDLFK 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:287510 11/84 (13%)
MADF 379..472 CDD:214738 22/155 (14%)
C2H2 Zn finger 476..496 CDD:275368 4/19 (21%)
C2H2 Zn finger 506..526 CDD:275368 6/19 (32%)
C2H2 Zn finger 537..557 CDD:275368 8/20 (40%)
C2H2 Zn finger 636..656 CDD:275368
zf-C2H2_8 639..712 CDD:292531
C2H2 Zn finger 666..688 CDD:275368
zf-C2H2 694..716 CDD:278523
C2H2 Zn finger 696..716 CDD:275368
zf-H2C2_2 708..733 CDD:290200
C2H2 Zn finger 724..744 CDD:275368
CG12391NP_610639.1 zf-AD 240..313 CDD:285071 19/107 (18%)
zf-C2H2 416..438 CDD:278523 5/21 (24%)
C2H2 Zn finger 418..438 CDD:275368 4/19 (21%)
zf-C2H2 443..465 CDD:278523 6/21 (29%)
C2H2 Zn finger 445..465 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..491 CDD:275368 7/16 (44%)
C2H2 Zn finger 504..521 CDD:275368 1/16 (6%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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