DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8944 and rgr

DIOPT Version :9

Sequence 1:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster
Sequence 2:NP_001163089.2 Gene:rgr / 35843 FlyBaseID:FBgn0267792 Length:889 Species:Drosophila melanogaster


Alignment Length:975 Identity:190/975 - (19%)
Similarity:324/975 - (33%) Gaps:330/975 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DEEIFRHCTKDCGMVTATDDFQYFALRCIFCSEKFLYFDSFIGHMQTVHLGDQS----------- 64
            |...||    .||.:|.:.|.|.|...|.||....|.|..|:.|::..|..|.|           
  Fly    16 DYAFFR----KCGEITVSPDVQSFGFNCAFCPAICLQFSVFMDHIRVQHTQDVSRRYETEEERCP 76

  Fly    65 -------------------------------------------------------------VANT 68
                                                                         |...
  Fly    77 QTDLVIMELDCPEIYPPEAPRKCSWEADMDIQLMSLVPSPPAVHIAPLPPPKTTETPEIDLVYVV 141

  Fly    69 SSRLP--------FNLGEPMSLSGRNGDLPNF---HEIEDLT---------------DADTALLE 107
            .:.||        .::.|....|.::.||..|   ||:..:|               ...||...
  Fly   142 ENPLPPSPPPSADISVDELPGSSPQSFDLDPFAVLHEVVTMTPPTPIAPPPGPPTPNPTPTATPA 206

  Fly   108 P-----QMVIKQELQDLPCS----DDDVVAGEEDDDEQ-----------RLNDSEADEDEAI--- 149
            |     ...::|.|..:..:    ..|.:||:.....:           |.:.:|..:|.|:   
  Fly   207 PLPRYETRRVRQRLCTISSTTINPGQDRLAGQRLSRREPNTGNAMQRKLRQSQNEQPKDGAVDEV 271

  Fly   150 -------------------------LPESDVPVVSS----------KTRARKKVTKQRQRDMSSE 179
                                     .|.:.:|..|.          ::::|:::  :|..:....
  Fly   272 AVEEHKGTEPTGQPEKSAMELTPPATPPTPLPPTSPTSSTASCADFQSKSRREL--ERNHEFVGC 334

  Fly   180 LLIAGDGDSSMDDYGDPDHSYMDDNSGEYMDFAG-FDGVNH---SG------------------- 221
            ||...:....:.:...||:.|....|. |.|.|| .:.:.|   ||                   
  Fly   335 LLREYERTEKLWNPRHPDYKYNAKRSA-YGDLAGPLESICHRQLSGAEIFAVLKELRCRYRRELK 398

  Fly   222 --------------FGTESDFLSYDEMVEESLLGRDREVTMHIKD------------------RK 254
                          :....|||..  ::|.....|:.:::....:                  .:
  Fly   399 KVNALGGKYKSRLWYFERMDFLRC--VIENRRAEREAKISNESTESEKSCETDADSCGKSSLYHE 461

  Fly   255 MIQFLIHSYQRNPFLWDHGNAQFRDRVKRARFLDWIVLEFKSRFNISLAKDAITRKWDNLRTVYK 319
            ::.|::.:::|...||:..:..:....|...|.| |.::.:...|..|:.:....:...|||.|:
  Fly   462 VLSFILDAFKRQECLWNPQHYDYTTCCKTELFRD-ISVQLQEELNYELSGEECCNEIQKLRTRYR 525

  Fly   320 RECNRMALEKTN--ISTLWYFKELHFLNEVYSYN--DKMSDAV-VKETSYRRRF---SAIWNDTS 376
            :|. ||.::...  :..||.:.|:.||..:....  :|:|..: |..::.:.:|   |:|..| :
  Fly   526 KEL-RMVIKHKGLYLPKLWCYDEMEFLQPILQEQIFNKISKKIGVVGSNQKTKFIDASSIRFD-N 588

  Fly   377 TAKLLSMVKRYQCFYNRFD---PDYRSKERRGEGLHQMAIELQQLI--DVTTIQISKRISQLRFD 436
            |.|.|..|:.|..:...:|   ||:||...|.:.|.||..|:....  ..|..|:.|.:..||.:
  Fly   589 TEKQLQFVEIYHNYSALWDVDHPDFRSNTYRSQALGQMLDEINTTFHTSYTAEQLEKTLFNLRKE 653

  Fly   437 YSKQKMERLNSERLGKKFIANYLYYDQMHFMDDDIPPFKCAHCPEIVQTLRELDLHMLTH---QP 498
            :|.||.:.|.........  ..|:.....|:|.::.||:|..|.::|:|..:..:|...|   ||
  Fly   654 FSAQKRKILTESEDSSSI--PLLHAKLAEFLDQNLGPFRCDICSDLVKTCDQYKVHRSAHDGTQP 716

  Fly   499 SLGGGYYCNICSIQFHNAQEFDNHKQLHLGGVTEIKFNCELCTASFREKANYDEHLRRHNEELFL 563
                 :.|.:|...|........|.:.|.   .:..::||.|...|........|||.|..|   
  Fly   717 -----FICTLCGKGFQMPCNLTVHIRRHR---RDFPYSCEQCDKRFATSTEVAIHLRTHTGE--- 770

  Fly   564 PSLALNHSIMEGGLGDDEIGVEGEESRGSGSRRKRRHAAKATDDMVDDDDRIGGGGGGGSGGGGT 628
                                                                             
  Fly   771 ----------------------------------------------------------------- 770

  Fly   629 DIAKPYGCDVCRRSFATPGHLNAHRIVHQDERERCYKCDYPQCNKSFVARNSLFEHLKQHYSNEE 693
               :||.||:|.:||.|....:.||..|.:  :..:.|  |.|.|.|..:|...:|:..|::..:
  Fly   771 ---RPYICDLCGKSFKTWSFFDIHRRRHLN--QSTFHC--PICAKGFYEKNRFTDHMNSHWAIRK 828

  Fly   694 FKCDICGKTFKSTKNLQNHKQIHDKIKRYVCQICGSAFAQAAGLYLHKRRHNRPNGAVGAVGRSG 758
            ..|.:|||||.:..||:.|.::|..:|:|.|..||..|||.|.|..||:|.:      .:||::|
  Fly   829 HLCTVCGKTFTTYGNLKKHTELHLAVKKYKCGTCGKRFAQFASLRWHKKREH------SSVGQAG 887

  Fly   759  758
              Fly   888  887

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:287510 19/86 (22%)
MADF 379..472 CDD:214738 26/97 (27%)
C2H2 Zn finger 476..496 CDD:275368 5/19 (26%)
C2H2 Zn finger 506..526 CDD:275368 4/19 (21%)
C2H2 Zn finger 537..557 CDD:275368 7/19 (37%)
C2H2 Zn finger 636..656 CDD:275368 8/19 (42%)
zf-C2H2_8 639..712 CDD:292531 23/72 (32%)
C2H2 Zn finger 666..688 CDD:275368 7/21 (33%)
zf-C2H2 694..716 CDD:278523 9/21 (43%)
C2H2 Zn finger 696..716 CDD:275368 9/19 (47%)
zf-H2C2_2 708..733 CDD:290200 10/24 (42%)
C2H2 Zn finger 724..744 CDD:275368 10/19 (53%)
rgrNP_001163089.2 MADF_DNA_bdg 335..420 CDD:287510 14/85 (16%)
MADF_DNA_bdg 465..551 CDD:287510 20/87 (23%)
MADF_DNA_bdg 595..682 CDD:287510 22/88 (25%)
C2H2 Zn finger 691..711 CDD:275368 5/19 (26%)
C2H2 Zn finger 719..739 CDD:275368 4/19 (21%)
zf-H2C2_2 731..756 CDD:290200 6/27 (22%)
COG5048 742..>824 CDD:227381 27/156 (17%)
C2H2 Zn finger 747..767 CDD:275368 7/19 (37%)
zf-H2C2_2 763..784 CDD:290200 12/91 (13%)
C2H2 Zn finger 775..795 CDD:275368 8/19 (42%)
C2H2 Zn finger 803..818 CDD:275368 6/16 (38%)
C2H2 Zn finger 831..851 CDD:275368 9/19 (47%)
C2H2 Zn finger 859..877 CDD:275368 9/17 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0012671
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.910

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