DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8944 and CG1603

DIOPT Version :9

Sequence 1:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster
Sequence 2:NP_001260778.1 Gene:CG1603 / 35683 FlyBaseID:FBgn0033185 Length:586 Species:Drosophila melanogaster


Alignment Length:767 Identity:155/767 - (20%)
Similarity:267/767 - (34%) Gaps:231/767 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 CGMVTATDDFQYFALRCIFCS--EKFLYFDSFIGHMQTVH-LGDQSVANTSSRLPFNLGEPMSLS 83
            ||.|.....::.|.|:|::||  .:...::.||.|:::.| ..|:.|                  
  Fly     4 CGNVMTNSKYEMFRLKCLYCSIESELKDWELFIVHVKSAHYCEDEDV------------------ 50

  Fly    84 GRNGDLPNFHEIEDLTDADTALLEPQMVIKQELQDLPCSDDDVVAGEEDDDEQRLNDS------- 141
                   ..:||::    ||          :||..:..:.|..:|...|:..:.:.:|       
  Fly    51 -------RINEIKE----DT----------EELYSVVDAADPAIAYGPDEFFEVIENSNGVDQWM 94

  Fly   142 EADEDEAILPESDVPVVSSKTRARKKVTKQRQRDMSSELLIAGDGDSSMDDYGDPDHSYMDDNSG 206
            |||..: |..|.|....|:.|            :.|.|.   |.|.||::.....:.:.||::| 
  Fly    95 EADSKD-IQYEEDATAWSAAT------------NNSWEF---GPGGSSLELPAGKEVTQMDESS- 142

  Fly   207 EYMDFAGFDGVNHSGFGTESD-------FLSYDEMVEESLLGRDREVT----------MHIKDRK 254
                      .||....|:.|       |:|.|::......||....|          ..|:...
  Fly   143 ----------QNHIPLNTDDDDVDCSDFFMSEDDLAPPRKPGRPPRRTRPGQVFKFKVSFIRSNP 197

  Fly   255 MIQFLIHSYQRNPFLWDHGNAQFRDRVKRARFLDWIVLEFKSRFNISLAKDAITRKWDNLRTVYK 319
            .:..||.:|:.:|.||:..:..::|...|:...:.|:.....:.|:....:.:.:..:.|...| 
  Fly   198 RVLHLIQAYKEHPCLWNPSDEHYQDEPARSMAYEAIMERMDRKANVLFTVEELKKTLEQLHVQY- 261

  Fly   320 RECNRMALEKTNISTL-----WYFKELHFLN----EVYSYNDKMSDAVVKETSYRRRFSAIWNDT 375
                .:|||......|     .||.:..||:    .....|::.:|....:.:::.      .:.
  Fly   262 ----TLALETKQRGKLVGLAARYFAKCEFLSVAPVVTPRENEEDNDLTAIKLNFKE------ENL 316

  Fly   376 STAKLLSMVKRYQCFYNRFDPDYRSKERRGEGLHQMAIELQQLIDVTTIQISKRISQLR---FDY 437
            .|...:.....|...||:..||:.|.|.|.:...:||.|.|.::......:...:::||   :| 
  Fly   317 ITTSFIETYANYPVLYNQALPDFGSIEIRADAFKRMAKEFQPVVKANETDVYIAVNKLRRWLYD- 380

  Fly   438 SKQKMERLNSERLGKKFIANYLYYDQMHFMDDDIPPFKCAHCPEIVQTLRELDLHMLTHQPSLGG 502
               .:.||.|:.|.:|.....:.|.||           |:..|.               :.|...
  Fly   381 ---AIRRLKSKELIQKCSKQEVQYLQM-----------CSFLPA---------------KGSESQ 416

  Fly   503 GYYCNICSIQFHNAQEFDNHKQLHL---GGVTEIKFNCELCTASFREKANYDEH-LRRHNEELFL 563
            ..||:.|..:||.    |.:.::|:   ..|.::.:.|..|...|....:.|.| ||.|.|    
  Fly   417 VLYCDYCDKRFHG----DYNLRVHIVKAHEVGDLPYLCSFCPRRFDRHVDMDRHKLRSHFE---- 473

  Fly   564 PSLALNHSIMEGGLGDDEIGVEGEESRGSGSRRKRRHAAKATDDMVDDDDRIGGGGGGGSGGGGT 628
                                            ||.:                             
  Fly   474 --------------------------------RKLK----------------------------- 477

  Fly   629 DIAKPYGCDVCRRSFATPGHLNAHRIVHQDERERCYKCDYPQCNKSFVARNSLFEHLK-QHYSNE 692
                   |..|.:|||....|..|.::|..||.  :.||.  |.|:|..:..|..|:. .|.:..
  Fly   478 -------CQYCEKSFAVDTDLKVHTLIHTGERP--HVCDI--CGKTFRLKLLLDHHVNGVHLNIR 531

  Fly   693 EFKCDICGKTFKSTKNLQNHKQIHDKIKRYVCQICGSAFAQAAGLYLHKRRH 744
            .:.|::|.|||:....|.||.:.|..|:...|:.|.:.|...:.|..|:|.|
  Fly   532 PYSCNMCTKTFRKKFELANHIKGHLNIRDKKCEYCDATFYDHSSLSRHRRSH 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:287510 18/89 (20%)
MADF 379..472 CDD:214738 23/95 (24%)
C2H2 Zn finger 476..496 CDD:275368 2/19 (11%)
C2H2 Zn finger 506..526 CDD:275368 5/19 (26%)
C2H2 Zn finger 537..557 CDD:275368 7/20 (35%)
C2H2 Zn finger 636..656 CDD:275368 7/19 (37%)
zf-C2H2_8 639..712 CDD:292531 23/73 (32%)
C2H2 Zn finger 666..688 CDD:275368 7/22 (32%)
zf-C2H2 694..716 CDD:278523 8/21 (38%)
C2H2 Zn finger 696..716 CDD:275368 8/19 (42%)
zf-H2C2_2 708..733 CDD:290200 8/24 (33%)
C2H2 Zn finger 724..744 CDD:275368 6/19 (32%)
CG1603NP_001260778.1 MADF_DNA_bdg 202..287 CDD:287510 18/89 (20%)
GT1 321..408 CDD:304916 24/101 (24%)
C2H2 Zn finger 420..441 CDD:275368 6/24 (25%)
COG5048 <424..583 CDD:227381 50/238 (21%)
C2H2 Zn finger 450..471 CDD:275368 7/20 (35%)
C2H2 Zn finger 478..498 CDD:275368 7/19 (37%)
zf-H2C2_2 490..513 CDD:290200 9/26 (35%)
C2H2 Zn finger 506..527 CDD:275368 7/22 (32%)
C2H2 Zn finger 535..555 CDD:275368 8/19 (42%)
C2H2 Zn finger 563..583 CDD:275368 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0012671
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.000

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