DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8944 and zf30C

DIOPT Version :9

Sequence 1:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster
Sequence 2:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster


Alignment Length:823 Identity:149/823 - (18%)
Similarity:261/823 - (31%) Gaps:300/823 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 NDEEIFRHCTKDCGMVTATDDFQYFALRCIFCSEKFLYFDSFIGHMQTVHLGDQSVANTSSRLPF 74
            ::||:.:|...:.|:..|....:.....|..|..::.|.:::..|.:| ..|::.:....||   
  Fly    70 HEEELTQHAKDEHGVTGAVAGQERKPFVCEKCGAEYKYQEAYRRHCRT-KCGEEKLPREESR--- 130

  Fly    75 NLGEPM-------------SLSGRNGDLPNFHEIEDLTDADTALLEPQMVIKQELQDLPCSDDDV 126
                ||             :||......|           ||.        .|...|.|.|.|.:
  Fly   131 ----PMECKCCYTRFSSASNLSKHRRSRP-----------DTC--------GQPEYDSPGSSDGM 172

  Fly   127 V---------AGEEDDDEQRLNDSEADEDEAILPESDVPVVSSKTRARKKVTKQRQRDMSSELLI 182
            .         ...:.|||...::...|.|:      |:|:.|     |.| ||.:|...:|    
  Fly   173 KKHKAFRKKDRNRDSDDEDTTSEESEDSDD------DIPLAS-----RLK-TKLKQESQNS---- 221

  Fly   183 AGDGDSSMDDYGDPDHSYMDDNSGEYMDFAGFD-----GVNHSGFGTESDFLSYDEMVEESLLGR 242
                     |.||....:..:||.:..|.:||.     .|....| .|.|| .|           
  Fly   222 ---------DSGDECPDFEPNNSEDDADASGFQLPPPAMVKVEAF-DEEDF-EY----------- 264

  Fly   243 DREVTMHIKDRKMIQFLIHSYQRNPFLWDHGNAQFRDRVKRARFLDWIVLEFKSRFNISLAKDAI 307
             ::.:|::|                                                        
  Fly   265 -QDASMYVK-------------------------------------------------------- 272

  Fly   308 TRKWDNLRTVYKRECNRMALEKTNISTLWYFKELHFLNEVYSYNDKMSDAVVKETSYRRRFSAIW 372
                               .|.|:|          |.||    .||:.|.::.|....:.|.:: 
  Fly   273 -------------------TESTDI----------FSNE----KDKLLDVLLNEGDGLKPFESL- 303

  Fly   373 NDTSTAKLLSMVKRYQCFYNRFDPDYRSKERRGEGL--HQMAIELQQLIDVTTIQI--------- 426
                                        |..:|.|:  ...|:.|.::.:...:::         
  Fly   304 ----------------------------KVEQGAGILDEIAAVPLVEVAEEDVLELRGHQMEKPP 340

  Fly   427 ---------SKRISQLRFDYSKQKMERLNS--------ERLGKKFIANYLYYDQMHFMDDDIPPF 474
                     .::|..::..|.|:...|..|        :|:.|  |:.....:::..::.....:
  Fly   341 GPRKRGRPPKEKIPVVKRKYRKRNAPRSPSPDDSSGTPKRVAK--ISKKELKERLKMINKMEKSW 403

  Fly   475 KCAHC----------------------PEIVQTLRELDLHMLTHQPSLGGGYYCNICSIQFHNAQ 517
            ||.||                      .|:.:..:::|:|....:..    :.|.|||..:...:
  Fly   404 KCPHCVKIYHIRKPYEKHLRDDHKLNEAEMKEIFKDVDVHAKLDEEV----FKCPICSKIYLVEK 464

  Fly   518 EFDNHKQLHLGGVTEIKFNCE-LCTASFREKANYDEHLRRHNEELFLPSLALNHSIMEGGLGDDE 581
            ....|.::| |...::.|.|. .|...|..|....||.|..::||........:......|.:.|
  Fly   465 RLVTHMKVH-GEDGKLTFKCPCYCNLFFATKEQATEHARAQHKELLYCEKCDKYMTGHDSLKNHE 528

  Fly   582 IGVEGEESRGSGSR--------RKRRHAAKATDDMVDDDDRIGGGGGGGSGGGGTDIAKP-YGCD 637
            .....::...|..|        :|.......:|.:..|..|:                 | |||.
  Fly   529 RNFHSKKEPRSQQRNLICDKCGKKFTGRTSLSDHVRSDCGRL-----------------PLYGCS 576

  Fly   638 VCRRSFATPGHLNAHRIVHQDERERCYKCDYPQCNKSFVARNSLFEHLK-QHYSNEEFKCDICGK 701
            ||.:..:|.|.|..|.::|:.:..  |:||  :|.|:|..:.....||| :|...:.:||.:|.|
  Fly   577 VCGKHLSTAGILKTHMLLHKADTP--YQCD--KCGKTFKVKAQYKSHLKTRHTDYKPYKCHLCPK 637

  Fly   702 TFKSTKNLQNHKQIHDKIKRYVCQICGSAFAQAAGLYLHKRRH 744
            .:...::|..|..:|..|||::|..||..|...:.|..|::.|
  Fly   638 EYPYRESLLTHMTVHTGIKRFLCNNCGKRFTCISNLQAHRKVH 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:287510 3/84 (4%)
MADF 379..472 CDD:214738 13/120 (11%)
C2H2 Zn finger 476..496 CDD:275368 6/41 (15%)
C2H2 Zn finger 506..526 CDD:275368 5/19 (26%)
C2H2 Zn finger 537..557 CDD:275368 7/20 (35%)
C2H2 Zn finger 636..656 CDD:275368 7/19 (37%)
zf-C2H2_8 639..712 CDD:292531 21/73 (29%)
C2H2 Zn finger 666..688 CDD:275368 8/22 (36%)
zf-C2H2 694..716 CDD:278523 6/21 (29%)
C2H2 Zn finger 696..716 CDD:275368 5/19 (26%)
zf-H2C2_2 708..733 CDD:290200 10/24 (42%)
C2H2 Zn finger 724..744 CDD:275368 6/19 (32%)
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368 3/11 (27%)
C2H2 Zn finger 98..117 CDD:275368 4/18 (22%)
C2H2 Zn finger 134..152 CDD:275368 2/17 (12%)
C2H2 Zn finger 511..532 CDD:275370 2/20 (10%)
COG5048 <523..>672 CDD:227381 43/169 (25%)
C2H2 Zn finger 546..566 CDD:275368 2/19 (11%)
C2H2 Zn finger 575..595 CDD:275368 7/19 (37%)
C2H2 Zn finger 603..624 CDD:275368 8/22 (36%)
C2H2 Zn finger 632..652 CDD:275368 5/19 (26%)
C2H2 Zn finger 660..680 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455441
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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