DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8944 and hang

DIOPT Version :9

Sequence 1:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster
Sequence 2:NP_001138204.1 Gene:hang / 32613 FlyBaseID:FBgn0026575 Length:2223 Species:Drosophila melanogaster


Alignment Length:371 Identity:79/371 - (21%)
Similarity:122/371 - (32%) Gaps:99/371 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   408 LHQMAIELQQLI-----DVTTIQISKRISQLRFDYSKQKMERLNSERLGKKFIANYLYYDQMHFM 467
            :|..||:.:.:|     ||.:|..|   |:......|:.:.:|.|...... .:.....|....|
  Fly  1328 VHGKAIKDEMIIKQFECDVCSIVYS---SESELQQHKRSVHKLTSASASTS-ASTSSKIDDDSLM 1388

  Fly   468 DDDIPP-----------------------FKCAHCPEIVQTLRELDLHMLTHQPSLGGGYYCNIC 509
            ||..|.                       ::|.:||....|.::|.:|:.:|.......|.|..|
  Fly  1389 DDGKPTSSDLADLSTLAAGGSTASAPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDC 1453

  Fly   510 --------SIQFHNAQEFDNHKQLHLGGVTEIKFNCELCTASFREKANYDEHLRRHNEELFLPSL 566
                    |:..|   .:..|.|:      .....|.||...|.::..:|.|....|.:....:.
  Fly  1454 GNVYSGRKSLWVH---RYKKHPQV------PNPAECSLCRKVFFDRQMHDNHTPTCNRKPITSTG 1509

  Fly   567 ALNHSIMEGGLGDDEIGVEGEESRGSGSRRKRRHAAKATDDMVDDD------DRIGGGGGG---G 622
            |  |...:|.|          .|..:..|...||.....||..|||      :|....|.|   |
  Fly  1510 A--HQQQDGQL----------HSHHTAKRTIFRHKTGDDDDEEDDDEQQQLEERANSDGNGTTVG 1562

  Fly   623 SGGGGTDIA--------KPYGCDVCRRSFATPGHLNAHRIVHQDERERCYKCDYPQCNKSFVARN 679
            ...|.|..|        ....|.:|...|....|.:.|...|:.|    ...|.|..        
  Fly  1563 VASGSTAAAGTSLKIRIPEVACTICGARFTDQEHFSKHIQKHEQE----LYVDNPLA-------- 1615

  Fly   680 SLFE---------HLKQHYSNEEFKCDICGKTFKSTKNLQNHKQIH 716
            ::|:         .:::...|.|:.||:|.|||.....|:.|::.|
  Fly  1616 AMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWH 1661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:287510
MADF 379..472 CDD:214738 16/68 (24%)
C2H2 Zn finger 476..496 CDD:275368 6/19 (32%)
C2H2 Zn finger 506..526 CDD:275368 6/27 (22%)
C2H2 Zn finger 537..557 CDD:275368 6/19 (32%)
C2H2 Zn finger 636..656 CDD:275368 5/19 (26%)
zf-C2H2_8 639..712 CDD:292531 18/81 (22%)
C2H2 Zn finger 666..688 CDD:275368 3/30 (10%)
zf-C2H2 694..716 CDD:278523 8/21 (38%)
C2H2 Zn finger 696..716 CDD:275368 8/19 (42%)
zf-H2C2_2 708..733 CDD:290200 3/9 (33%)
C2H2 Zn finger 724..744 CDD:275368
hangNP_001138204.1 zf-AD 80..154 CDD:285071
C2H2 Zn finger 1036..1057 CDD:275368
C2H2 Zn finger 1067..1088 CDD:275368
C2H2 Zn finger 1279..1298 CDD:275371
C2H2 Zn finger 1308..1325 CDD:275371
C2H2 Zn finger 1420..1440 CDD:275368 6/19 (32%)
C2H2 Zn finger 1450..1468 CDD:275368 4/20 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455443
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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