DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8944 and CG12219

DIOPT Version :10

Sequence 1:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster
Sequence 2:NP_572312.1 Gene:CG12219 / 31572 FlyBaseID:FBgn0043796 Length:562 Species:Drosophila melanogaster


Alignment Length:526 Identity:81/526 - (15%)
Similarity:133/526 - (25%) Gaps:267/526 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly   421 VTTIQISKRISQLRFDYSKQKMERLNSERLGKKFIANYLYYD-QMHFMDD------DIPP---FK 475
            ::|...::..|||...::..|:..|....|..:|:|    .| .:::.:|      |..|   .:
  Fly    62 ISTCICTECCSQLESFHNFWKLVELKQTTLCSQFLA----IDCDVNWSEDGSETQLDAQPQLLLE 122

  Fly   476 CAHCPEIVQTLRELDLHMLTHQPSLGGGYYCNICSIQFHNAQEFDNHKQLHLGGVTEIKFNCELC 540
            .|..|::|             .|:....:.|..|...|...:..:.|...|.|   :....|..|
  Fly   123 PAEEPKVV-------------TPTTANKFPCMFCEKSFKMRRYLEEHIATHTG---DRPIACPYC 171

  Fly   541 TASFREKANYDEHLRRHNEELFL------------------------------------------ 563
            ..:||.::|...|::..:...:|                                          
  Fly   172 EMAFRCRSNMYTHVKSKHTTQWLKAREERDAAKSNQNHTTPEETAPAVLVPVPAPAPALASAPAS 236

  Fly   564 ------------------------------------------------PSLALNHSIMEGGLGDD 580
                                                            ||.|:|.:|.:      
  Fly   237 SASPGNTVNPAATATPASSATPTTNLAAAPLPSPPTVQQLPLSVIKSQPSEAMNLTITK------ 295

  Fly   581 EIGVEGEESRGSGSRRKRR--HAAKAT-----DDMVDDDD------------------------- 613
               .....||||.:|..||  |:.|..     .|:.|:|.                         
  Fly   296 ---TPPSGSRGSRNRSSRRKTHSPKKVQHTEGSDVSDEDSPQKRLKENELILANYNAVAAAVVAA 357

  Fly   614 -RIGGGGGG------------------------------------GSGGG--------GTDIAKP 633
             .:.|...|                                    |:...        ||.:|.|
  Fly   358 ASLTGNPPGQPDSLQQRLCASLLQQQHQEQLFAVMSATAAAAAAVGTSSATTTTTTTTGTMMAHP 422

  Fly   634 YG------------------------CDVCRRSFATPGHLNAHRIVHQDERERCYKCDYPQCNKS 674
            ||                        ..:|......||           :..||           
  Fly   423 YGNHPPSETDKRPAAPLQAVIHAAPVSIICPNCGELPG-----------QNHRC----------- 465

  Fly   675 FVARNSLFEHLKQHYSNEEFKCDICGKTFKSTKNLQNHKQIHDKIKRYVCQICGSAFAQAAGLYL 739
                          .|..::.||:|||:||..:.|:.|...|..:|.:.|..|.:.|...:.:|.
  Fly   466 --------------LSKPKYACDVCGKSFKMKRYLEEHFATHTGVKLHTCAFCPTEFRSKSNMYH 516

  Fly   740 H-KRRH 744
            | ||:|
  Fly   517 HTKRKH 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:463144
MADF 379..472 CDD:214738 12/57 (21%)
C2H2 Zn finger 476..496 CDD:275368 3/19 (16%)
C2H2 Zn finger 506..526 CDD:275368 4/19 (21%)
C2H2 Zn finger 537..557 CDD:275368 6/19 (32%)
C2H2 Zn finger 636..656 CDD:275368 3/19 (16%)
COG5048 <666..734 CDD:227381 15/67 (22%)
C2H2 Zn finger 666..688 CDD:275368 0/21 (0%)
C2H2 Zn finger 696..716 CDD:275368 9/19 (47%)
C2H2 Zn finger 724..744 CDD:275368 7/20 (35%)
CG12219NP_572312.1 zf-AD 2..91 CDD:214871 6/28 (21%)
PHA00733 <117..189 CDD:177301 17/87 (20%)
C2H2 Zn finger 140..160 CDD:275368 4/19 (21%)
zf-H2C2_2 152..177 CDD:463886 6/27 (22%)
C2H2 Zn finger 168..186 CDD:275368 6/17 (35%)
C2H2 Zn finger 473..493 CDD:275370 9/19 (47%)
C2H2 Zn finger 501..522 CDD:275370 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.

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