DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8944 and Zfp707

DIOPT Version :9

Sequence 1:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster
Sequence 2:NP_001129369.1 Gene:Zfp707 / 315088 RGDID:1311188 Length:390 Species:Rattus norvegicus


Alignment Length:257 Identity:62/257 - (24%)
Similarity:87/257 - (33%) Gaps:87/257 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   497 QPSL---------GGGYYCNICSIQFHNAQEFDNHKQLHLGGVTEIKFNCELCTASFREKANYDE 552
            ||.|         |..:.|.||............|:.:|.|   ...|.|..|..:||..:|...
  Rat   179 QPGLKEQGKSAAEGHPFICGICGKALSCHSRLAAHQTVHTG---TRSFECFECGQTFRWVSNLLR 240

  Fly   553 HLRRHNEELFLPSLALNHSIMEGGLGDDEIGVEGEESRGSGSRRKRRHAAKATDDMVDDDDRIGG 617
            |.|.|..|                                                         
  Rat   241 HQRNHTSE--------------------------------------------------------- 248

  Fly   618 GGGGGSGGGGTDIAKPYGCDVCRRSFATPGHLNAHRIVHQDERERCYKCDYPQCNKSFVARNSLF 682
                          ||:.|:||.::|:....|..|:.:|.:.|.  |.|.  .|.|:|..:::|.
  Rat   249 --------------KPFCCEVCGQAFSLKDRLAQHQKIHTEHRP--YVCS--DCGKAFKQKSNLL 295

  Fly   683 EHLKQHYSNEEFKCDICGKTFKSTKNLQNHKQIHDKIKRYVCQICGSAFAQAAGLYLHKRRH 744
            .|...|.....|.||.|||||::.:||.:|::||...|.|.|..||.||....|..:|:|.|
  Rat   296 RHKLVHTGERPFYCDNCGKTFRTKENLNHHQRIHSGEKPYTCGECGKAFRWPKGFSIHQRLH 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:287510
MADF 379..472 CDD:214738
C2H2 Zn finger 476..496 CDD:275368
C2H2 Zn finger 506..526 CDD:275368 4/19 (21%)
C2H2 Zn finger 537..557 CDD:275368 7/19 (37%)
C2H2 Zn finger 636..656 CDD:275368 6/19 (32%)
zf-C2H2_8 639..712 CDD:292531 24/72 (33%)
C2H2 Zn finger 666..688 CDD:275368 6/21 (29%)
zf-C2H2 694..716 CDD:278523 11/21 (52%)
C2H2 Zn finger 696..716 CDD:275368 10/19 (53%)
zf-H2C2_2 708..733 CDD:290200 12/24 (50%)
C2H2 Zn finger 724..744 CDD:275368 8/19 (42%)
Zfp707NP_001129369.1 KRAB 40..100 CDD:214630
KRAB 40..76 CDD:279668
C2H2 Zn finger 197..217 CDD:275368 4/19 (21%)
C2H2 Zn finger 225..245 CDD:275368 7/19 (37%)
zf-H2C2_2 237..261 CDD:290200 10/94 (11%)
COG5048 <249..385 CDD:227381 42/113 (37%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
zf-H2C2_2 266..290 CDD:290200 9/27 (33%)
zf-C2H2 279..301 CDD:278523 7/23 (30%)
C2H2 Zn finger 281..301 CDD:275368 6/21 (29%)
zf-H2C2_2 293..318 CDD:290200 11/24 (46%)
C2H2 Zn finger 309..329 CDD:275368 10/19 (53%)
zf-H2C2_2 321..344 CDD:290200 10/22 (45%)
C2H2 Zn finger 337..357 CDD:275368 8/19 (42%)
C2H2 Zn finger 365..385 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.