DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8944 and Zfp438

DIOPT Version :9

Sequence 1:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster
Sequence 2:XP_017456046.1 Gene:Zfp438 / 307024 RGDID:1307214 Length:800 Species:Rattus norvegicus


Alignment Length:196 Identity:45/196 - (22%)
Similarity:64/196 - (32%) Gaps:69/196 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   626 GGTDIAKPYG-CDVCRRSFATPGHLNAHRIVHQDERERCYKCDYPQCNKSFVARNSLFEHLKQHY 689
            |.:.|.||:. |.||...|....||..|...|.:.|.  |.|..  |.|::|...||..|:|.|:
  Rat   486 GFSGIKKPWHMCPVCNYHFQFKHHLLDHMNTHTNRRP--YSCGI--CRKTYVRPGSLSAHMKLHH 546

  Fly   690 SNEEFK----CDICGKTFKSTKNLQNH-KQIH--------------------------------- 716
            .:...|    |:.|.|.|...:....| |::|                                 
  Rat   547 GDNRPKKLVCCEFCAKVFGHVRVYFGHLKEVHRVVISTEPTPSELQSEDTPKNKDRDPSMQGPDS 611

  Fly   717 -------------------DKIKRYV----CQICGSAFAQAAGLYLHKRRHNRP-NGAVGAVGRS 757
                               |::|..:    |||...:||:.....||.  |... .|.:..||:.
  Rat   612 SLERETKSSLEEDFLLNQADEVKLQIRCGRCQITAQSFAEIKFHLLHV--HGEEIQGRLQEVGQP 674

  Fly   758 G 758
            |
  Rat   675 G 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:287510
MADF 379..472 CDD:214738
C2H2 Zn finger 476..496 CDD:275368
C2H2 Zn finger 506..526 CDD:275368
C2H2 Zn finger 537..557 CDD:275368
C2H2 Zn finger 636..656 CDD:275368 7/19 (37%)
zf-C2H2_8 639..712 CDD:292531 22/76 (29%)
C2H2 Zn finger 666..688 CDD:275368 8/21 (38%)
zf-C2H2 694..716 CDD:278523 7/26 (27%)
C2H2 Zn finger 696..716 CDD:275368 6/20 (30%)
zf-H2C2_2 708..733 CDD:290200 9/81 (11%)
C2H2 Zn finger 724..744 CDD:275368 7/19 (37%)
Zfp438XP_017456046.1 C2H2 Zn finger 497..517 CDD:275368 7/19 (37%)
zf-H2C2_2 509..534 CDD:290200 9/28 (32%)
C2H2 Zn finger 525..545 CDD:275368 8/21 (38%)
C2H2 Zn finger 557..575 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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