DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8944 and bcl-11

DIOPT Version :9

Sequence 1:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster
Sequence 2:NP_001122913.1 Gene:bcl-11 / 179019 WormBaseID:WBGene00017430 Length:694 Species:Caenorhabditis elegans


Alignment Length:87 Identity:26/87 - (29%)
Similarity:41/87 - (47%) Gaps:7/87 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   659 ERERCYKCDYPQCNKSFVARNSLFEHLKQHYSNEEFKCDICGKTFKSTKNLQNHKQIHDK--IKR 721
            ::|||     ..|||.|..|::|..||:.|...:.:||.:|......:..|..|.:.|.:  .:.
 Worm   496 KKERC-----NFCNKVFTNRSNLIVHLRSHTGEKPYKCQLCPYACAQSSKLTRHMRTHGQQGKET 555

  Fly   722 YVCQICGSAFAQAAGLYLHKRR 743
            |.|.||...|:..:.|..|.|:
 Worm   556 YHCYICRMPFSVHSTLEKHMRK 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:287510
MADF 379..472 CDD:214738
C2H2 Zn finger 476..496 CDD:275368
C2H2 Zn finger 506..526 CDD:275368
C2H2 Zn finger 537..557 CDD:275368
C2H2 Zn finger 636..656 CDD:275368
zf-C2H2_8 639..712 CDD:292531 16/52 (31%)
C2H2 Zn finger 666..688 CDD:275368 8/21 (38%)
zf-C2H2 694..716 CDD:278523 5/21 (24%)
C2H2 Zn finger 696..716 CDD:275368 4/19 (21%)
zf-H2C2_2 708..733 CDD:290200 8/26 (31%)
C2H2 Zn finger 724..744 CDD:275368 7/20 (35%)
bcl-11NP_001122913.1 zf-C2H2 499..520 CDD:278523 10/25 (40%)
zf-C2H2_2 500..>577 CDD:289522 23/81 (28%)
C2H2 Zn finger 500..520 CDD:275368 9/24 (38%)
zf-H2C2_2 512..537 CDD:290200 7/24 (29%)
C2H2 Zn finger 528..548 CDD:275368 4/19 (21%)
C2H2 Zn finger 558..576 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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