DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11679 and rmnd1

DIOPT Version :9

Sequence 1:NP_573063.1 Gene:CG11679 / 32515 FlyBaseID:FBgn0030678 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001018608.1 Gene:rmnd1 / 553810 ZFINID:ZDB-GENE-050522-21 Length:410 Species:Danio rerio


Alignment Length:405 Identity:140/405 - (34%)
Similarity:202/405 - (49%) Gaps:85/405 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 RIPRQQTQTQWMMDRRRW---LASEATSSAA---------APAQAASVPRTQTQPRVKPLPLAEE 69
            |.||.|..|......:.|   :..::|::|.         :..:....|||:...|.....|.|:
Zfish    66 RGPRFQVLTPLNFISKTWSFQVRLQSTTAATNIVLKQGGMSGKRTFKGPRTKQPSRASQPSLEED 130

  Fly    70 RLESILSPIRTRIIRKKRLAIDELSALGFLNTRGYTTAEEYNLEDLQIALREQNLYETKRF---- 130
            .::.|                            .|.||::|:|..|...|......|.|.|    
Zfish   131 MMQCI----------------------------AYATADQYHLPTLCHDLIAHGFSEIKEFPRDA 167

  Fly   131 -----FSTDNLDVEQNVLFVAAKYPTGQQPREIFFFREGSVVFWNCSDIETNNVLSFLRAFERES 190
                 ..|||         .|..|.:|    .|||||||||||||..|......:..|...|.:.
Zfish   168 SNVLVMGTDN---------SAKPYDSG----TIFFFREGSVVFWNVEDKTMKTTMKILEQHEIQP 219

  Fly   191 YVSALVHGESEVMPYTYIPSTAVDVEGDLVAESSDFNVTSRAFFQNGKFFVTADTD---SFLYKY 252
            |..|||:.|:|.:.||             |.|       ..:..::|.|....:.|   ..|.|:
Zfish   220 YEVALVYWENEEINYT-------------VGE-------GHSKLRHGVFLFNEELDYEQVILEKF 264

  Fly   253 TFSNAMAQSIKLGMWEATLDRYIDSIEHLTEDLKRGRRLRISRAAMLRKTGELFALRHVINLSSD 317
            .||||::.|:||.:||.|||.:::||:.:.|.||.|:|:::|||.:::|.||||:|||.||||||
Zfish   265 AFSNALSLSVKLAIWEVTLDSFVESIQSIPEMLKSGQRVKLSRADVMQKIGELFSLRHCINLSSD 329

  Fly   318 LLDAPDFYWDREELEALYLQVCSYFSISRRTKVMNEKINHCVELAELVSHNLNDAHHIRLEWMII 382
            ||..||||||||:||.||.:.|.:.:|:||.||:|||:.||.||.:|:.::|::.|.:||||||:
Zfish   330 LLITPDFYWDREDLELLYDKTCQFLNINRRVKVVNEKLQHCTELTDLMRNHLSEKHSLRLEWMIV 394

  Fly   383 ILIMVEVGFEVLHFV 397
            :||.:||.||:...:
Zfish   395 VLITIEVMFELARVI 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11679NP_573063.1 DUF155 158..352 CDD:280704 87/196 (44%)
rmnd1NP_001018608.1 DUF155 187..364 CDD:280704 87/196 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587277
Domainoid 1 1.000 162 1.000 Domainoid score I3959
eggNOG 1 0.900 - - E1_COG1723
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5675
Inparanoid 1 1.050 218 1.000 Inparanoid score I3569
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D415618at33208
OrthoFinder 1 1.000 - - FOG0003403
OrthoInspector 1 1.000 - - oto38919
orthoMCL 1 0.900 - - OOG6_101806
Panther 1 1.100 - - LDO PTHR16255
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2342
SonicParanoid 1 1.000 - - X2300
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.790

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