DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11679 and Rmnd1

DIOPT Version :10

Sequence 1:NP_573063.1 Gene:CG11679 / 32515 FlyBaseID:FBgn0030678 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001035217.2 Gene:Rmnd1 / 292268 RGDID:1309546 Length:450 Species:Rattus norvegicus


Alignment Length:369 Identity:134/369 - (36%)
Similarity:197/369 - (53%) Gaps:49/369 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 RWLASEATSSAAAPAQAASVPRTQTQPRVK-PLPLAEERLESILSPIRTRIIRKKRLAIDELSAL 96
            :|.........::.:..|.||: |..|::| ||..:..|     .|.||.:   ..|:::|    
  Rat   118 KWFIKAVKRHHSSVSNEALVPK-QDLPQIKRPLKASRTR-----QPSRTNL---PDLSVNE---- 169

  Fly    97 GFLNTRGYTTAEEYNLEDLQIALREQNLYETKRFFSTDNLDVEQ------NVLFVAAKYPTGQ-Q 154
            ..:....:.||:||:|..|           ::...|...::|..      |:|.:..:....: .
  Rat   170 DLMQCTAFATADEYHLGSL-----------SQELVSCGYVEVTSLPRDAANILVMGVESSAKEGD 223

  Fly   155 PREIFFFREGSVVFWNCSDIETNNVLSFLRAFERESYVSALVHGESEVMPYTYIPSTAVDVEGDL 219
            ...||.||||:.||||..|....:|:..|...|.:.|..||||.|:|.:.||       ..||..
  Rat   224 AGTIFLFREGAAVFWNVKDKTMKHVMQVLERHETQPYEVALVHWENEELNYT-------KTEGQS 281

  Fly   220 VAESSDFNVTSRAFFQNGKFFVTADTDSFLYKYTFSNAMAQSIKLGMWEATLDRYIDSIEHLTED 284
            .....:..:.|.....          ||.|.|:.||||:..|:||.:||||||::|:||:.:.|.
  Rat   282 KLHRGEIKLNSELDLD----------DSILEKFAFSNALCLSVKLAIWEATLDKFIESIQSIPEA 336

  Fly   285 LKRGRRLRISRAAMLRKTGELFALRHVINLSSDLLDAPDFYWDREELEALYLQVCSYFSISRRTK 349
            ||.|:::::|...:::|.||||||||.||||||.|..|||||||..||.||.:.|.:.||:||.|
  Rat   337 LKAGKKVKLSHKEVMQKMGELFALRHRINLSSDFLITPDFYWDRANLEELYDKTCQFLSITRRVK 401

  Fly   350 VMNEKINHCVELAELVSHNLNDAHHIRLEWMIIILIMVEVGFEV 393
            |||||:.||:||.:|:.::||:...:||||||:|||.:||.||:
  Rat   402 VMNEKLQHCMELTDLMRNHLNEKRALRLEWMIVILITIEVMFEL 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11679NP_573063.1 DUF155 158..352 CDD:460604 85/193 (44%)
Rmnd1NP_001035217.2 DUF155 227..404 CDD:460604 85/193 (44%)

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