DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11679 and Rmnd1

DIOPT Version :9

Sequence 1:NP_573063.1 Gene:CG11679 / 32515 FlyBaseID:FBgn0030678 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001035217.1 Gene:Rmnd1 / 292268 RGDID:1309546 Length:450 Species:Rattus norvegicus


Alignment Length:369 Identity:132/369 - (35%)
Similarity:195/369 - (52%) Gaps:49/369 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 RWLASEATSSAAAPAQAASVPRTQTQPRVK-PLPLAEERLESILSPIRTRIIRKKRLAIDELSAL 96
            :|.........::.:..|.||: |..|::| ||..:..|     .|.||.:   ..|:::|    
  Rat   118 KWFIKAVKRHHSSVSNEALVPK-QDLPQIKRPLKASRTR-----QPSRTNL---PDLSVNE---- 169

  Fly    97 GFLNTRGYTTAEEYNLEDLQIALREQNLYETKRFFSTDNLDVEQ------NVLFVAAKYPTGQ-Q 154
            ..:....:.||:||:|..|           ::...|...::|..      |:|.:..:....: .
  Rat   170 DLMQCTAFATADEYHLGSL-----------SQELVSCGYVEVTSLPRDATNILVMGVESSAKEGD 223

  Fly   155 PREIFFFREGSVVFWNCSDIETNNVLSFLRAFERESYVSALVHGESEVMPYTYIPSTAVDVEGDL 219
            ...||.||||:.||||..|....:|...|...|.:.|..||||.|:|.:.||       ..||..
  Rat   224 AGTIFLFREGAAVFWNVKDKTMKHVTQVLERHETQPYEVALVHWENEELNYT-------KTEGQS 281

  Fly   220 VAESSDFNVTSRAFFQNGKFFVTADTDSFLYKYTFSNAMAQSIKLGMWEATLDRYIDSIEHLTED 284
            .....:..:.|.....          ||.|.|:.||||:..|:||.:||||||::|:||:.:.|.
  Rat   282 KLHRGEIKLNSELDLD----------DSILEKFAFSNALCLSVKLAIWEATLDKFIESIQSIPEA 336

  Fly   285 LKRGRRLRISRAAMLRKTGELFALRHVINLSSDLLDAPDFYWDREELEALYLQVCSYFSISRRTK 349
            ||.|:::::|...:::|.||||||||.||||||.|..|||||||..||.||.:.|.:.:|:||.|
  Rat   337 LKAGKKVKLSHKEVMQKMGELFALRHRINLSSDFLITPDFYWDRANLEELYDKTCQFLNITRRVK 401

  Fly   350 VMNEKINHCVELAELVSHNLNDAHHIRLEWMIIILIMVEVGFEV 393
            |||.|:.||:||.:|:.::||:...:||||||:|||.:||.||:
  Rat   402 VMNGKLQHCMELTDLMRNHLNEKRALRLEWMIVILITIEVMFEL 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11679NP_573063.1 DUF155 158..352 CDD:280704 84/193 (44%)
Rmnd1NP_001035217.1 DUF155 227..404 CDD:280704 84/193 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346298
Domainoid 1 1.000 164 1.000 Domainoid score I3860
eggNOG 1 0.900 - - E1_COG1723
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5675
Inparanoid 1 1.050 218 1.000 Inparanoid score I3499
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D415618at33208
OrthoFinder 1 1.000 - - FOG0003403
OrthoInspector 1 1.000 - - oto96390
orthoMCL 1 0.900 - - OOG6_101806
Panther 1 1.100 - - LDO PTHR16255
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2300
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.760

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