DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11679 and rmnd1

DIOPT Version :10

Sequence 1:NP_573063.1 Gene:CG11679 / 32515 FlyBaseID:FBgn0030678 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_004912862.1 Gene:rmnd1 / 101733789 XenbaseID:XB-GENE-6035341 Length:417 Species:Xenopus tropicalis


Alignment Length:352 Identity:128/352 - (36%)
Similarity:183/352 - (51%) Gaps:38/352 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 SAAAPAQAASVPRTQTQPRVKPLPLAEERLESILSPIRTRIIRKKRLAIDELSALGFLNTRGYTT 106
            |...|.|...|..|:..|:               ||...:..|..:..:.|.:.|  :....:.|
 Frog    99 SVTPPKQVMPVSLTKRPPK---------------SPRSKQPSRTNQPLLSETTDL--MQCTAFAT 146

  Fly   107 AEEYNLEDLQIALREQNLYETKRFFSTDNLDVEQNVLFVAAKYPTGQQPREIFFFREGSVVFWNC 171
            |:||:|..|...|......|....    ..|....:||.............:||||||:|||||.
 Frog   147 ADEYHLGTLSHDLASHGYLELPSL----PRDASNVLLFEVDNGAKDTDSGTVFFFREGAVVFWNV 207

  Fly   172 SDIETNNVLSFLRAFERESYVSALVHGESEVMPYTYIPSTAVDVEGDLVAESSDFNVTSRAFFQN 236
            .:....:.|..|...|.:.|..||||.|:|.:.|::.......|:|::|..:.            
 Frog   208 EERIMKHTLQILERHEIQPYEVALVHWENEEINYSFGDGHTKLVKGEIVLNTQ------------ 260

  Fly   237 GKFFVTADTDSFLYKYTFSNAMAQSIKLGMWEATLDRYIDSIEHLTEDLKRGRRLRISRAAMLRK 301
                 ....:..|.|:.||||:..|:||.:||||||.::.||:.:.|.||..:::::|...:::|
 Frog   261 -----LELEEVILEKFAFSNALCLSVKLAIWEATLDTFVSSIQSIPEMLKARKKVKLSHDDVMQK 320

  Fly   302 TGELFALRHVINLSSDLLDAPDFYWDREELEALYLQVCSYFSISRRTKVMNEKINHCVELAELVS 366
            .||||||||.||||||||..||||||||.||.||.:.|.:.||:||.||:|||:.||.||.:|:.
 Frog   321 IGELFALRHRINLSSDLLITPDFYWDRENLEHLYDKTCQFLSINRRVKVINEKLQHCTELTDLMR 385

  Fly   367 HNLNDAHHIRLEWMIIILIMVEVGFEV 393
            ::||:.|.:||||||:|||.:||.||:
 Frog   386 NHLNEKHALRLEWMIVILITIEVMFEL 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11679NP_573063.1 DUF155 158..352 CDD:460604 82/193 (42%)
rmnd1XP_004912862.1 DUF155 194..371 CDD:460604 82/193 (42%)

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