DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp6 and ACT7

DIOPT Version :10

Sequence 1:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_196543.1 Gene:ACT7 / 830841 AraportID:AT5G09810 Length:377 Species:Arabidopsis thaliana


Alignment Length:396 Identity:105/396 - (26%)
Similarity:189/396 - (47%) Gaps:47/396 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VVLDNGAHTAKVGLANQDEPHVV-PNCIMKAKSE-------RRRAFVGNQIDECRDTSALYYILA 62
            :|.|||....|.|.|..|.|..| |:.:.:.:..       ::.|:||::....|....|.|  .
plant    10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKY--P 72

  Fly    63 FQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYK 127
            .:.|.:.||...:.:|.:.|..: :..:.|...:::||..:|.::.:|...:|:||.:.|..:|.
plant    73 IEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYV 136

  Fly   128 TTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQL 192
            ...|.|:.:     :..|||     .|::|.|...:|.||...|..:...|.|:|:.|:.||:.|
plant   137 AIQAVLSLY-----ASGRTT-----GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSL 191

  Fly   193 KELISYR--HLNVMDESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVTVDYVLPDFTTVKRG 255
            .::::.|  ......|..:|..|||.:.:||.|::|.::...|..   .|..:|.|||       
plant   192 MKILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQELETAKSSS---SVEKNYELPD------- 246

  Fly   256 YVRVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRELLL 320
                          .|::::..|||..||:||.||.||::..||.|...:.:..|..:..::|..
plant   247 --------------GQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYG 297

  Fly   321 NILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYGGKEVATSPNFEEFVYTQD 385
            ||::.|||..|||...|:.:::.||.|..:::.::.|.:.....|.||..:|:...|::...::.
plant   298 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKS 362

  Fly   386 DYEEYG 391
            :|:|.|
plant   363 EYDESG 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp6NP_511165.1 ASKHA_NBD_Arp6 5..391 CDD:466816 104/394 (26%)
ACT7NP_196543.1 ASKHA_NBD_actin 8..372 CDD:466823 105/396 (27%)

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