DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp6 and ACT7

DIOPT Version :9

Sequence 1:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_196543.1 Gene:ACT7 / 830841 AraportID:AT5G09810 Length:377 Species:Arabidopsis thaliana


Alignment Length:396 Identity:105/396 - (26%)
Similarity:189/396 - (47%) Gaps:47/396 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VVLDNGAHTAKVGLANQDEPHVV-PNCIMKAKSE-------RRRAFVGNQIDECRDTSALYYILA 62
            :|.|||....|.|.|..|.|..| |:.:.:.:..       ::.|:||::....|....|.|  .
plant    10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKY--P 72

  Fly    63 FQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYK 127
            .:.|.:.||...:.:|.:.|..: :..:.|...:::||..:|.::.:|...:|:||.:.|..:|.
plant    73 IEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYV 136

  Fly   128 TTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQL 192
            ...|.|:.:     :..|||     .|::|.|...:|.||...|..:...|.|:|:.|:.||:.|
plant   137 AIQAVLSLY-----ASGRTT-----GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSL 191

  Fly   193 KELISYR--HLNVMDESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVTVDYVLPDFTTVKRG 255
            .::::.|  ......|..:|..|||.:.:||.|::|.::...|..   .|..:|.|||       
plant   192 MKILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQELETAKSSS---SVEKNYELPD------- 246

  Fly   256 YVRVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRELLL 320
                          .|::::..|||..||:||.||.||::..||.|...:.:..|..:..::|..
plant   247 --------------GQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYG 297

  Fly   321 NILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYGGKEVATSPNFEEFVYTQD 385
            ||::.|||..|||...|:.:::.||.|..:::.::.|.:.....|.||..:|:...|::...::.
plant   298 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKS 362

  Fly   386 DYEEYG 391
            :|:|.|
plant   363 EYDESG 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp6NP_511165.1 ACTIN 3..398 CDD:214592 105/396 (27%)
COG5277 6..391 CDD:227602 104/394 (26%)
ACT7NP_196543.1 NBD_sugar-kinase_HSP70_actin 5..377 CDD:418402 105/396 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54227
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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