DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp6 and ARP7

DIOPT Version :9

Sequence 1:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_567105.1 Gene:ARP7 / 825254 AraportID:AT3G60830 Length:363 Species:Arabidopsis thaliana


Alignment Length:399 Identity:97/399 - (24%)
Similarity:178/399 - (44%) Gaps:61/399 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VVLDNGAHTAKVGLANQDE-PHVVPNCIMKAKSERRRAFVGNQIDECRDTSALYYILAFQRGYLL 69
            :|:|.|:...|.|.|..|: |.::....||...:...:...|......|.:    :...:||.:.
plant     4 LVVDAGSKFLKAGAAIPDQSPAMIIPSQMKRMVDDGSSSADNPTTVFEDVT----LDPIERGLIR 64

  Fly    70 NWHTQKTVWDYIFSKDGIGCSLENR-NIVITEPQMNFQSIQEATLEILFEEYKVDGVYKTTAADL 133
            :|...:.:..|:. ..|:|....|. ||:.|:|....::|:|..::::||.:.|.|.|.:..|.|
plant    65 DWDAMEDLLRYVV-YTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFNVSGFYASEQAVL 128

  Fly   134 AAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGI--RRIDMGGKALT----NQL 192
            :.:          .:..::...:|:|:....:.|.:.|  .:|.|  :|.::||..||    .:|
plant   129 SLY----------AVGRISGCTVDIGHGKIDIAPVLEG--AVQHIASKRFELGGTELTKLFAQEL 181

  Fly   193 KELISYRHLNVMDESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVTVDYVLPDFTTVKRGYV 257
            .:.....:|::.|    |.::||.....|||     ::.|.:.:..|:. .:.|||         
plant   182 GKTNPSMNLSMSD----VEKLKEQYANCAED-----EIAYKKTQNCEIE-QHTLPD--------- 227

  Fly   258 RVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRELLLNI 322
                        .|::|:..||::|.|.||.||.:|:::.||.|.:...:.....|.||:||.|.
plant   228 ------------GQVISIGRERYSVGEALFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENT 280

  Fly   323 LIVGGSAQFPGFLPRLKRDLR----ALVPDDLEVSLICPEDPVRY-AWYGGKEVATSPNFEEFVY 382
            ::.||:....||..|.:::..    |:.|..::.....||:...| ||.||..:|.....:....
plant   281 VLCGGTTSMTGFESRFQKEANLCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFPQNQHV 345

  Fly   383 TQDDYEEYG 391
            |:.||:|.|
plant   346 TKADYDETG 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp6NP_511165.1 ACTIN 3..398 CDD:214592 97/399 (24%)
COG5277 6..391 CDD:227602 96/397 (24%)
ARP7NP_567105.1 ACTIN 3..363 CDD:214592 97/399 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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