DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp6 and ACT3

DIOPT Version :10

Sequence 1:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_566988.1 Gene:ACT3 / 824542 AraportID:AT3G53750 Length:377 Species:Arabidopsis thaliana


Alignment Length:396 Identity:102/396 - (25%)
Similarity:190/396 - (47%) Gaps:47/396 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VVLDNGAHTAKVGLANQDEPHVV-PNCIMKAKSE-------RRRAFVGNQIDECRDTSALYYILA 62
            :|.|||....|.|.|..|.|..| |:.:.:.:..       ::.|:||::....|....|.|  .
plant    10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKY--P 72

  Fly    63 FQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYK 127
            .:.|.:.||...:.:|.:.|..: :..:.|...|::||..:|.::.:|...:|:||.:....:|.
plant    73 IEHGIVNNWDDMEKIWHHTFYNE-LRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYV 136

  Fly   128 TTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQL 192
            ...|.|:.:     :..|||     .|::|.|...:|.||...|..:...|.|:|:.|:.||:.|
plant   137 AIQAVLSLY-----ASGRTT-----GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 191

  Fly   193 KELISYR--HLNVMDESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVTVDYVLPDFTTVKRG 255
            .::::.|  ......|..:|..|||.:|::|.|::|.::   :.:....|..:|.|||       
plant   192 MKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELE---TAKTSSSVEKNYELPD------- 246

  Fly   256 YVRVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRELLL 320
                          .|::::.:|||..||:|:.||.||::..||.|...:.:..|..:..::|..
plant   247 --------------GQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYG 297

  Fly   321 NILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYGGKEVATSPNFEEFVYTQD 385
            ||::.||:..|||...|:.:::.||.|..:::.::.|.:.....|.||..:|:...|::....:.
plant   298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362

  Fly   386 DYEEYG 391
            :|:|.|
plant   363 EYDESG 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp6NP_511165.1 ASKHA_NBD_Arp6 5..391 CDD:466816 101/394 (26%)
ACT3NP_566988.1 ASKHA_NBD_actin 8..372 CDD:466823 102/396 (26%)

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