DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp6 and ACT11

DIOPT Version :10

Sequence 1:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_187818.1 Gene:ACT11 / 820385 AraportID:AT3G12110 Length:377 Species:Arabidopsis thaliana


Alignment Length:57 Identity:14/57 - (24%)
Similarity:27/57 - (47%) Gaps:3/57 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 LFNYQTDIIKSRFQADNSYKSYMHCIKQTYL-ERGYRG--FFVGLNSALIRAFPSNA 262
            ||...:.::||..|...:...:..|:..|.: :.|.:.  ||:.|:|.|....|:.:
plant   223 LFLIASKLLKSISQVGVNNTCFPFCLNSTVMAQHGNKFILFFLTLDSFLFFCIPNQS 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp6NP_511165.1 ASKHA_NBD_Arp6 5..391 CDD:466816 14/57 (25%)
ACT11NP_187818.1 ASKHA_NBD_actin 8..372 CDD:466823 14/57 (25%)

Return to query results.
Submit another query.