DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp6 and ACT9

DIOPT Version :9

Sequence 1:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_181739.1 Gene:ACT9 / 818809 AraportID:AT2G42090 Length:366 Species:Arabidopsis thaliana


Alignment Length:393 Identity:115/393 - (29%)
Similarity:190/393 - (48%) Gaps:46/393 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VVLDNGAHTAKVGLANQDEPHVVPNCIMKAKSE---RRRAFVGNQIDECRDTSALYYILAFQRGY 67
            :|.|.|....:.|.|..:.|.||..|::....:   ...::||.:....||...|..  ..:.|.
plant     4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRDGLNPNESYVGEEGHANRDILTLKD--PMEHGI 66

  Fly    68 LLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYKTTAAD 132
            :.||...:.:|.|.|..: :....|...:::||...|.::.:|...:|:||.:.|..:|.:..:.
plant    67 VNNWDDMEKIWHYTFYNE-LRVDPEEHPVLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSV 130

  Fly   133 LAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQLKELIS 197
            |..:     |..|||     .:::|:|...:|.||...|..:..||.|:|:||:.||:.|.|:::
plant   131 LYLY-----SSGRTT-----GVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMT 185

  Fly   198 YR--HLNVMDESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVTVD--YVLPDFTTVKRGYVR 258
            .|  ......|..:|..|||.:|:||.|::|.|     |:..:..|:|  |||||          
plant   186 ERGYTYTTSAEREIVRDIKEKLCYVALDYEQEM-----EKTTKGWTIDKTYVLPD---------- 235

  Fly   259 VPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRELLLNIL 323
                       .|.:::..|||..||:||.||.||.:..||.||..:.:..||.:..|::..|||
plant   236 -----------GQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRDMYGNIL 289

  Fly   324 IVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYGGKEVATSPNFEEFVYTQDDYE 388
            :.||:....|...|:.::|.||||..::|.::.|.:.....|.||..:|:...|.:...|:|:||
plant   290 MTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWITKDEYE 354

  Fly   389 EYG 391
            |:|
plant   355 EHG 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp6NP_511165.1 ACTIN 3..398 CDD:214592 115/393 (29%)
COG5277 6..391 CDD:227602 114/391 (29%)
ACT9NP_181739.1 ACTIN 2..365 CDD:214592 115/393 (29%)
NBD_sugar-kinase_HSP70_actin 1..365 CDD:302596 115/393 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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