DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp6 and ACTL8

DIOPT Version :10

Sequence 1:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_110439.2 Gene:ACTL8 / 81569 HGNCID:24018 Length:366 Species:Homo sapiens


Alignment Length:413 Identity:99/413 - (23%)
Similarity:174/413 - (42%) Gaps:73/413 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MANAVVVLDNGAHTAKVGLANQDEPHVV-PNCI--MKAKSE------RRRAFVGNQIDECRDTSA 56
            ||...|::|:|:...|.|.|..:||.:| ||.:  :..|..      |||..:|  ||.|...:.
Human     1 MAARTVIIDHGSGFLKAGTAGWNEPQMVFPNIVNYLPCKENPGPSYARRRVSLG--IDICHPDTF 63

  Fly    57 LYYILAFQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRN-------IVITEPQMNFQSIQEATLE 114
            .|.|   :||.:|||...:.:|.::         |||..       ::|||..:...:.::..||
Human    64 SYPI---ERGRILNWEGVQYLWSFV---------LENHRREQEVPPVIITETPLREPADRKKMLE 116

  Fly   115 ILFEEYKVDGVYKTTAADLAAFNYVADSEERTTMES--LNCIIIDVGYSFTHVVPFVLGRRVLQG 177
            ||||...|..|            .:||..:.:...|  |..:::|.||..|.|.||..||.:...
Human   117 ILFELLHVPSV------------LLADQLQMSLYASGLLTGVVVDSGYGLTRVQPFHQGRPLPAS 169

  Fly   178 IRRIDMGGKALTNQL-----KELISYRHLNVMDESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKR 237
            .:.::..|:.|:..|     ||....|.|..: |:..|.|:.:  |:|.::..:|:.....::..
Human   170 GKTLEFAGQDLSAYLLKSLFKEDCDRRCLFQL-ETVAVTQMNK--CYVPQNLGEALDFRERQQSA 231

  Fly   238 REVTVDYVLPDFTTVKRGYVRVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEA 302
            .:.:..|.|||.:.|:                     |...:...||:.|:|.........||.|
Human   232 LDESNTYQLPDGSRVE---------------------LTPMQRVAPEMFFSPQVFEQPGPSIPRA 275

  Fly   303 VADCLKACPWEAHRELLLNILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYG 367
            :.:.:::|.......|:.:::..||:..:|||..||.|:|........:.::....:.....|.|
Human   276 IVESVESCEISLRPLLVSHVMACGGNTLYPGFTKRLFRELMGDHVSSTKATVWEGSNRNFSVWLG 340

  Fly   368 GKEVATSPNFEEFVYTQDDYEEY 390
            ...||....::....::::|.|:
Human   341 ASVVAHLSTYQSEWMSREEYGEH 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp6NP_511165.1 ASKHA_NBD_Arp6 5..391 CDD:466816 97/409 (24%)
ACTL8NP_110439.2 ACTIN 4..363 CDD:214592 96/408 (24%)

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