DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp6 and Actrt3

DIOPT Version :10

Sequence 1:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_083966.1 Gene:Actrt3 / 76652 MGIID:1923902 Length:369 Species:Mus musculus


Alignment Length:402 Identity:108/402 - (26%)
Similarity:185/402 - (46%) Gaps:51/402 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VVLDNGAHTAKVGLANQDEPH-VVPNCIMKAK----SERRRAFVGNQIDECRDTSALYYILAFQR 65
            ||:|||:...|.|||...||. |.||.:.::|    ..|:...||:|..|.|...::.|  ..:|
Mouse     8 VVIDNGSGMIKAGLAGTREPQFVYPNILGRSKGHTADSRQELCVGDQAQERRSFLSISY--PVER 70

  Fly    66 GYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYKTTA 130
            |.:.:|...:.:|.:|:..: :..:..:..:::|||.:|..:.::...|:.||...|...|.:..
Mouse    71 GLISSWGDMEIMWKHIYDYN-LNLNASDGPVLVTEPALNPLADRQHISEVFFENLGVPAFYMSAQ 134

  Fly   131 ADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQLKEL 195
            |.||.|     :...||     .::::.|...|..||...|..:..|::::::.|..||:.|..|
Mouse   135 AVLALF-----AAGFTT-----GLVLNSGAGITQCVPIFEGYCLSHGVKQLNVAGSDLTSYLMML 189

  Fly   196 ISYRHLNVM--DESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVTVD--YVLPDFTTVKRGY 256
            :....:.::  .:..||..|||:.|:||        ::|.:|..::..::  |.|||..|||   
Mouse   190 LKGDGIMLLRTGDRKVVTDIKENACYVA--------MNYEDEMTKDSNLEKIYTLPDGKTVK--- 243

  Fly   257 VRVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRELLLN 321
                              |..:.|..||.||:|..:.|...||.:.....:..|..:.......|
Mouse   244 ------------------LHKQLFHCPEALFSPYLVNVDAPGIDKMCFGSIMKCDTDLRNSFFSN 290

  Fly   322 ILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYGGKEVATSPNFEEFVYTQDD 386
            |::.|||..|||...||.:|:..|.|.:..|.:|.|.:.....|.||..:|:...|::...|..:
Mouse   291 IILSGGSTSFPGLDKRLIKDVAKLAPANTAVQVIAPPERKISVWMGGSILASLSAFQDMWITAAE 355

  Fly   387 YEEYGFQGINQR 398
            :||.|...::||
Mouse   356 FEEVGPNIVHQR 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp6NP_511165.1 ASKHA_NBD_Arp6 5..391 CDD:466816 105/393 (27%)
Actrt3NP_083966.1 ASKHA_NBD_actin_Arp-T1-3 6..360 CDD:466848 105/393 (27%)

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