DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp6 and ACTR6

DIOPT Version :9

Sequence 1:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_071941.1 Gene:ACTR6 / 64431 HGNCID:24025 Length:396 Species:Homo sapiens


Alignment Length:393 Identity:186/393 - (47%)
Similarity:268/393 - (68%) Gaps:17/393 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VVLDNGAHTAKVGLANQDEPHVVPNCIMKAKSERRRAFVGNQIDECRDTSALYYILAFQRGYLLN 70
            :||||||:.||:|.:::: ..|:|||..::|:.|.:.|..|||||.:|.|.|:|||.||:|||:|
Human     4 LVLDNGAYNAKIGYSHEN-VSVIPNCQFRSKTARLKTFTANQIDEIKDPSGLFYILPFQKGYLVN 67

  Fly    71 WHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYKTTAADLAA 135
            |..|:.||||:|.|:.......:.||:||||..||.||||:..|||||||:...|.:..|..|:|
Human    68 WDVQRQVWDYLFGKEMYQVDFLDTNIIITEPYFNFTSIQESMNEILFEEYQFQAVLRVNAGALSA 132

  Fly   136 FNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQLKELISYRH 200
            ..|..|:.     ..|.|||:|.||||||:||:...::..:.|.||::|||.|||.|||:||||.
Human   133 HRYFRDNP-----SELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYRQ 192

  Fly   201 LNVMDESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVTVDYVLPDFTTVKRGYVRVPGKPRE 265
            |:||||:||:||:|||||:|::||.:.|.:...:.:...|.:|||||||:|:|:|:.    ||||
Human   193 LHVMDETHVINQVKEDVCYVSQDFYRDMDIAKLKGEENTVMIDYVLPDFSTIKKGFC----KPRE 253

  Fly   266 D-------EEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRELLLNIL 323
            :       :..:|::.|.||||.|||:||||||||:|::|||||:...::..|.|.......||:
Human   254 EMVLSGKYKSGEQILRLANERFAVPEILFNPSDIGIQEMGIPEAIVYSIQNLPEEMQPHFFKNIV 318

  Fly   324 IVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYGGKEVATSPNFEEFVYTQDDYE 388
            :.||::.||||..|:..::|.|.|.|.:||::.||:|:.|||.|||.::.:.:||:.|.|::|||
Human   319 LTGGNSLFPGFRDRVYSEVRCLTPTDYDVSVVLPENPITYAWEGGKLISENDDFEDMVVTREDYE 383

  Fly   389 EYG 391
            |.|
Human   384 ENG 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp6NP_511165.1 ACTIN 3..398 CDD:214592 186/393 (47%)
COG5277 6..391 CDD:227602 185/391 (47%)
ACTR6NP_071941.1 ACTIN 2..394 CDD:214592 186/393 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165145068
Domainoid 1 1.000 383 1.000 Domainoid score I824
eggNOG 1 0.900 - - E1_KOG0680
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6451
Inparanoid 1 1.050 384 1.000 Inparanoid score I2050
Isobase 1 0.950 - 0.861654 Normalized mean entropy S1456
OMA 1 1.010 - - QHG54227
OrthoDB 1 1.010 - - D462325at33208
OrthoFinder 1 1.000 - - FOG0005146
OrthoInspector 1 1.000 - - oto90805
orthoMCL 1 0.900 - - OOG6_103780
Panther 1 1.100 - - LDO PTHR11937
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R85
SonicParanoid 1 1.000 - - X3663
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.750

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