DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp6 and actr6

DIOPT Version :10

Sequence 1:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_001016472.1 Gene:actr6 / 549226 XenbaseID:XB-GENE-5860964 Length:396 Species:Xenopus tropicalis


Alignment Length:393 Identity:186/393 - (47%)
Similarity:261/393 - (66%) Gaps:17/393 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VVLDNGAHTAKVGLANQDEPHVVPNCIMKAKSERRRAFVGNQIDECRDTSALYYILAFQRGYLLN 70
            :||||||:.||:|.:: .:..|:|||..:.|:.|.:.|..|||||.:|.|.|:|||.:|:|||:|
 Frog     4 LVLDNGAYNAKIGYSH-GQVSVIPNCQFRTKTARLKTFTANQIDEIKDPSGLFYILPYQKGYLVN 67

  Fly    71 WHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYKTTAADLAA 135
            |..|:.||||:|.|:.......:.||:||||..||.||||:..|||||||:.....:..|..|:|
 Frog    68 WDVQRQVWDYLFGKEMFQVDFPDSNIIITEPYFNFSSIQESMNEILFEEYQFQAALRINAGALSA 132

  Fly   136 FNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQLKELISYRH 200
            ..|..|:.     ..|.|||:|.||||||:|||...::..:||.||::|||.:||.|||:||||.
 Frog   133 HRYFRDNP-----SELCCIIVDSGYSFTHIVPFCRSKKKKEGIIRINVGGKLMTNHLKEIISYRQ 192

  Fly   201 LNVMDESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVTVDYVLPDFTTVKRGYVRVPGKPRE 265
            |.||||:||:||:|||||:|:.||.:.|:....:.:...|.||||||||:|:|:|:.    ||||
 Frog   193 LQVMDETHVINQVKEDVCYVSTDFYKDMETAKLKGEENSVMVDYVLPDFSTIKKGFC----KPRE 253

  Fly   266 D-------EEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRELLLNIL 323
            :       ...:|::.|.||||.|||:||:|||||:|::|||||:...:...|.|.......||:
 Frog   254 EMVFSGKTTAGEQILRLTNERFAVPEILFHPSDIGIQEMGIPEAIVHSINNLPEEMQPHFYKNIV 318

  Fly   324 IVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYGGKEVATSPNFEEFVYTQDDYE 388
            :.||:..||||..|:..::|.|.|.|.:||:|.||:|:.|||.|||.::.:.:||:.|.|::|||
 Frog   319 LTGGNTLFPGFRERVFSEVRKLTPTDFDVSVILPENPISYAWEGGKIISENDDFEDMVVTREDYE 383

  Fly   389 EYG 391
            |.|
 Frog   384 ENG 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp6NP_511165.1 ASKHA_NBD_Arp6 5..391 CDD:466816 185/391 (47%)
actr6NP_001016472.1 ASKHA_NBD_Arp6 3..386 CDD:466816 185/391 (47%)

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