Protein Alignment Arp6 and Act88F

DIOPT Version :9

• Sequence 1: NP_511165.1
• Gene: Arp6 / 32514
• FlyBaseID: FBgn0011741
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: NP_524367.1
• Gene: Act88F / 41885
• FlyBaseID: FBgn0000047
• Length: 376
• Species: Drosophila melanogaster
• Alignment Length: 406
• Identity: 109/406 - (26%)
• Similarity: 195/406 - (48%)
• Gaps: 54/406 - (13%)

  Fly     6 VVLDNGAHTAKVGLANQDEPHVV-PNCIMKAKSE-------RRRAFVGNQIDECRDTSALYYILA 62
            :|:|||:...|.|.|..|.|..| |:.:.:.:.:       ::.::||::....|....|.|  .
  Fly     9 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY--P 71

  Fly    63 FQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYK 127
            .:.|.:.||...:.:|.:.|..: :..:.|...:::||..:|.::.:|...:|:||.:....:|.
  Fly    72 IEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYV 135

  Fly   128 TTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQL 192
            ...|.|:.:     :..|||     .|::|.|...:|.||...|..:...|.|:|:.|:.||:.|
  Fly   136 AIQAVLSLY-----ASGRTT-----GIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYL 190

  Fly   193 KELISYR--HLNVMDESHVVNQIKEDVCFVAEDFKQAM---QVHYSEEKRREVTVDYVLPDFTTV 252
            .::::.|  ......|..:|..|||.:|:||.||:|.|   ....|.||      .|.|||
  Fly   191 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK------SYELPD---- 245

  Fly   253 KRGYVRVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRE 317
                             .|::::.||||..||.||.||.:|::..||.|.|.:.:..|..:..::
  Fly   246 -----------------GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKD 293

  Fly   318 LLLNILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYGGKEVATSPNFEEFVY 382
            |..|.::.||:..:||...|:::::.||.|..:::.:|.|.:.....|.||..:|:...|::...
  Fly   294 LYANSVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358

  Fly   383 TQDDYEEYGFQGINQR 398
            ::.:|:|.| .||..|
  Fly   359 SKQEYDESG-PGIVHR 373

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arp6	NP_511165.1	ACTIN	3..398	CDD:214592	108/404 (27%)
		COG5277	6..391	CDD:227602	105/397 (26%)
Act88F	NP_524367.1	PTZ00281	1..376	CDD:173506	109/406 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45467834
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D649708at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11937
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.950