DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp6 and actr2a

DIOPT Version :10

Sequence 1:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_998664.1 Gene:actr2a / 406820 ZFINID:ZDB-GENE-040426-2894 Length:394 Species:Danio rerio


Alignment Length:415 Identity:117/415 - (28%)
Similarity:179/415 - (43%) Gaps:68/415 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VVVLDNGAHTAKVGLANQDEP-HVVPNCIMK---------AKSERRRAFVGNQIDECRDTSALYY 59
            |||.|||....|.|.|..:.| |:.|..:.:         ...|.:...||::..|.|....:.|
Zfish     8 VVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTAKVGNIEIKDLMVGDEASELRSMLEVNY 72

  Fly    60 ILAFQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDG 124
              ..:.|.:.||...|.:|||.|..:.:.....|..|::|||.||....:|..:|::||.|:..|
Zfish    73 --PMENGIVRNWDDMKHLWDYTFGPEKLNIDSRNCKILLTEPPMNPTKNREKIIEVMFETYQFSG 135

  Fly   125 VYKTTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALT 189
            ||....|.|..:          ....|..:::|.|...||:.|...|..:....||:|:.|:.:|
Zfish   136 VYIAIQAVLTLY----------AQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDIT 190

  Fly   190 NQLKELISYR--HLNVMDESHVVNQIKEDVCFVAEDFKQAMQVHYSEEK-RREVTV---DYVLPD 248
            ..|.:|:..|  ..|...:...|..:||.:|:|..:.:|       |:| ..|.||   .|.|||
Zfish   191 RYLIKLLLLRGYAFNHSADFETVRMMKEKLCYVGYNIEQ-------EQKLALETTVLVESYTLPD 248

  Fly   249 FTTVKRGYVRVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWE 313
            ...:|.|                     .|||..||.||.|..|.|:.||:.|.:.:.::|...:
Zfish   249 GRVIKVG---------------------GERFGAPEALFQPHLINVEGVGVAELLFNTIQAADID 292

  Fly   314 AHRELLLNILIVGGSAQFPGFLPRLKRDLRALV--------PDDLEVSLICPEDPVR---YAWYG 367
            ...|...:|::.|||..:||...||:|:|:.|.        .|.|....|..|||.|   ..:.|
Zfish   293 TRAEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVDKLSKFKIRIEDPPRRKHMVFLG 357

  Fly   368 GKEVA-TSPNFEEFVYTQDDYEEYG 391
            |..:| ...:.:.|..|:::|:|.|
Zfish   358 GAVLADIMKDKDNFWMTREEYQEKG 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp6NP_511165.1 ASKHA_NBD_Arp6 5..391 CDD:466816 116/413 (28%)
actr2aNP_998664.1 ASKHA_NBD_Arp2 7..388 CDD:466821 117/415 (28%)

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