DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp6 and actr1b

DIOPT Version :10

Sequence 1:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_998537.1 Gene:actr1b / 406681 ZFINID:ZDB-GENE-040426-2695 Length:376 Species:Danio rerio


Alignment Length:408 Identity:107/408 - (26%)
Similarity:190/408 - (46%) Gaps:50/408 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MANAVVVLDNGAHTAKVGLANQDEP-HVVPNCIMKAKSERRRA-------FVGNQIDECRDTSAL 57
            :||..||:|||:...|.|.|....| :..||.:.:.|..|..|       |:|.:.:|.|...::
Zfish     7 IANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDLFIGPKAEEHRGLLSV 71

  Fly    58 YYILAFQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKV 122
            .|  ..:.|.:.:|:..:.:|.|::||:.:....|...:::||..:|....:|...|:.||.:.|
Zfish    72 RY--PMEHGIVKDWNDMERIWQYVYSKEQLQTFSEEHPVLLTEAPLNPSKNRERAAEVFFETFNV 134

  Fly   123 DGVYKTTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKA 187
            ..::.:..|.|:.:     :..|||     .:::|.|...||.||...|..:...|.|:|:.|:.
Zfish   135 PALFISMQAVLSLY-----ATGRTT-----GVVLDAGDGVTHAVPIYEGFAIPHSIMRVDIAGRD 189

  Fly   188 LTNQLKELISYR--HLNVMDESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVTVDYVLPDFT 250
            ::..|:.|:...  ..:...|..||..|||..|:::.:.::       :|........|.|||.:
Zfish   190 VSRYLRLLLRKEGYDFHTSAEFEVVRTIKERACYLSLNPQK-------DETLETEKAQYTLPDGS 247

  Fly   251 TVKRGYVRVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAH 315
            |:..|    |.                 ||..|||||.|..||.:..||.|.:|..::....:..
Zfish   248 TLDIG----PA-----------------RFRAPELLFRPDLIGDESEGIHEVLAFAIQKSDMDLR 291

  Fly   316 RELLLNILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYGGKEVATSPNFEEF 380
            |.|..||::.|||....||..||..:::.|.|.|:::.:..|::.:...|.||..:|:...|::.
Zfish   292 RTLFSNIVLSGGSTLLKGFGDRLLSEVKKLAPKDVKIKISAPQERLYSTWIGGSILASLDTFKKM 356

  Fly   381 VYTQDDYEEYGFQGINQR 398
            ..::.:|||...:.|:::
Zfish   357 WVSKKEYEEDRARAIHRK 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp6NP_511165.1 ASKHA_NBD_Arp6 5..391 CDD:466816 104/395 (26%)
actr1bNP_998537.1 ASKHA_NBD_Arp1 9..375 CDD:466820 106/406 (26%)

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