Protein Alignment Arp6 and Arp53D

DIOPT Version :9

• Sequence 1: NP_511165.1
• Gene: Arp6 / 32514
• FlyBaseID: FBgn0011741
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: NP_477037.2
• Gene: Arp53D / 36879
• FlyBaseID: FBgn0011743
• Length: 411
• Species: Drosophila melanogaster
• Alignment Length: 399
• Identity: 103/399 - (25%)
• Similarity: 175/399 - (43%)
• Gaps: 52/399 - (13%)

  Fly     3 NAVVVLDNGAHTAKVGLANQDEPHVV-PNCIMKAK-------SERRRAFVGNQIDECRDTSALYY 59
            :|.||:|||:...|.|.:.:|.|..| |:.:.:.:       |....:.:|......|....|.|
  Fly    46 HAAVVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAARKRGILTLKY 110

  Fly    60 ILAFQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDG 124
              ..:.|.:.||...:.||.:.:  :.:.....:...::||..:|.:..:|...||:||.::|..
  Fly   111 --PIEHGMVKNWDEMEMVWQHTY--ELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPA 171

  Fly   125 VYKTTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALT 189
            .|....|.|:.:     :..||.     .|::|.|...||.||...|..:.....|:|:.|:.||
  Fly   172 FYVAVQAVLSLY-----ATGRTV-----GIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLT 226

  Fly   190 NQLKELISYR--HLNVMDESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVTVDYVLPDFTTV 252
            :.|.:|:..|  .:....|..:|.:|||.:|:|:.::.:.|.:|...|       .|.|||
  Fly   227 DYLCKLLLERGVTMGTSAEREIVREIKEKLCYVSMNYAKEMDLHGKVE-------TYELPD---- 280

  Fly   253 KRGYVRVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRE 317
                            .|::|..| |||..||.||.||.:|.:.:||.||....:..|..:..::
  Fly   281 ----------------GQKIVLGC-ERFRCPEALFQPSLLGQEVMGIHEATHHSITNCDMDLRKD 328

  Fly   318 LLLNILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYGGKEVATSPNFEEFVY 382
            :..||::.||:..|.....|..:||..:.|..:.:.:....|.....|.||..:|:..:|:....
  Fly   329 MYANIVLSGGTTMFRNIEHRFLQDLTEMAPPSIRIKVNASPDRRFSVWTGGSVLASLTSFQNMWI 393

  Fly   383 TQDDYEEYG 391
            ...:|||.|
  Fly   394 DSLEYEEVG 402

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arp6	NP_511165.1	ACTIN	3..398	CDD:214592	103/399 (26%)
		COG5277	6..391	CDD:227602	101/394 (26%)
Arp53D	NP_477037.2	ACTIN	46..411	CDD:214592	103/399 (26%)
		NBD_sugar-kinase_HSP70_actin	47..411	CDD:302596	103/398 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45467777
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D649708at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11937
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.950