Protein Alignment Arp6 and Arp2

DIOPT Version :9

• Sequence 1: NP_511165.1
• Gene: Arp6 / 32514
• FlyBaseID: FBgn0011741
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: NP_001259621.1
• Gene: Arp2 / 32623
• FlyBaseID: FBgn0011742
• Length: 399
• Species: Drosophila melanogaster
• Alignment Length: 428
• Identity: 112/428 - (26%)
• Similarity: 177/428 - (41%)
• Gaps: 85/428 - (19%)

  Fly     5 VVVLDNGAHTAKVGLANQDEP-HVVPNCIMKAKSERRRA-----------------FVGNQIDEC 51
            |:|.|||....|.|.|..:.| |:.|:.:.:...   ||                 .||::..:.
  Fly     8 VIVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMI---RAVNKIGDIEVKDLHVDDLMVGDEASQL 69

  Fly    52 RDTSALYYILAFQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEIL 116
            |....:.|  ..:.|.:.||.....||||.|....:.....|..|::|||.||....:|..:|::
  Fly    70 RSLLEVSY--PMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVM 132

  Fly   117 FEEYKVDGVYKTTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVP----FVLGRRVLQG 177
            ||:|..|..|....|.|..:          ....::.::||.|...||:.|    |.|....
  Fly   133 FEKYGFDSAYIAIQAVLTLY----------AQGLISGVVIDSGDGVTHICPVYEEFALPHLT--- 184

  Fly   178 IRRIDMGGKALTNQLKELISYR--HLNVMDESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREV 240
             ||:|:.|:.:|..|.:|:..|  ..|...:...|..:||.:|::..|      :...:....|.
  Fly   185 -RRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRIMKEKLCYIGYD------IEMEQRLALET 242

  Fly   241 TV---DYVLPDFTTVKRGYVRVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEA 302
            ||   .|.|||...:|.|                     .|||..||.||.|..|.|:..||.|.
  Fly   243 TVLVESYTLPDGRVIKVG---------------------GERFEAPEALFQPHLINVEGPGIAEL 286

  Fly   303 VADCLKACPWEAHRELLLNILIVGGSAQFPGFLPRLKRDLRAL-----VPDDLEVSL---ICPED 359
            ..:.::|...:...||..:|::.|||..:||...||:|:::.|     :.:|.|...   |..||
  Fly   287 AFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKNDTEKLAKFKIRIED 351

  Fly   360 PVR---YAWYGGKEVA-TSPNFEEFVYTQDDYEEYGFQ 393
            |.|   ..:.||..:| .:.:.:.|..::.:|:|.|.:
  Fly   352 PPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLK 389

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arp6	NP_511165.1	ACTIN	3..398	CDD:214592	112/428 (26%)
		COG5277	6..391	CDD:227602	110/423 (26%)
Arp2	NP_001259621.1	ACTIN	6..393	CDD:214592	112/428 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45467837
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D649708at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11937
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.950