DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp6 and acta2

DIOPT Version :10

Sequence 1:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_997785.2 Gene:acta2 / 322509 ZFINID:ZDB-GENE-030131-1229 Length:377 Species:Danio rerio


Alignment Length:399 Identity:105/399 - (26%)
Similarity:191/399 - (47%) Gaps:47/399 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NAVVVLDNGAHTAKVGLANQDEPHVV-PNCIMKAKSE-------RRRAFVGNQIDECRDTSALYY 59
            :..:|.|||:...|.|.|..|.|..| |:.:.:.:.:       ::.::||::....|....|.|
Zfish     7 STALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY 71

  Fly    60 ILAFQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDG 124
              ..:.|.:.||...:.:|.:.|..: :..:.|....::||..:|.::.:|...:|:||.:.|..
Zfish    72 --PIEHGIITNWDDMEKIWHHSFYNE-LRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPA 133

  Fly   125 VYKTTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALT 189
            :|....|.|:.:     :..|||     .|::|.|...||.||...|..:...|.|:|:.|:.||
Zfish   134 MYVAIQAVLSLY-----ASGRTT-----GIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188

  Fly   190 NQLKELISYRHLNVMD--ESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVTVDYVLPDFTTV 252
            :.|.::::.|..:.:.  |..:|..|||.:|:||.||:..|....|.....:   .|.|||    
Zfish   189 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK---SYELPD---- 246

  Fly   253 KRGYVRVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRE 317
                             .|::::.||||..||.||.||.||::..||.|...:.:..|..:..::
Zfish   247 -----------------GQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKD 294

  Fly   318 LLLNILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYGGKEVATSPNFEEFVY 382
            |..|.::.||:..:||...|:::::.||.|..:::.:|.|.:.....|.||..:|:...|::...
Zfish   295 LYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 359

  Fly   383 TQDDYEEYG 391
            ::.:|:|.|
Zfish   360 SKQEYDEAG 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp6NP_511165.1 ASKHA_NBD_Arp6 5..391 CDD:466816 104/395 (26%)
acta2NP_997785.2 ASKHA_NBD_actin 8..372 CDD:466823 105/398 (26%)

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