Protein Alignment Arp6 and Actr6

DIOPT Version :9

• Sequence 1: NP_511165.1
• Gene: Arp6 / 32514
• FlyBaseID: FBgn0011741
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: XP_006241305.1
• Gene: Actr6 / 314718
• RGDID: 1304609
• Length: 410
• Species: Rattus norvegicus
• Alignment Length: 372
• Identity: 176/372 - (47%)
• Similarity: 252/372 - (67%)
• Gaps: 16/372 - (4%)

  Fly    27 VVPNCIMKAKSERRRAFVGNQIDECRDTSALYYILAFQRGYLLNWHTQKTVWDYIFSKDGIGCSL 91
            |:|||..::|:.|.:.|..|||||.:|.|.|:|||.||:|||:||..|:.||||:|.|:......
  Rat    38 VIPNCQFRSKTARLKTFTANQIDEIKDPSGLFYILPFQKGYLVNWDVQRQVWDYLFGKEMYQVDF 102

  Fly    92 ENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYKTTAADLAAFNYVADSEERTTMESLNCIII 156
            .:.||:||||..||.||||:..|||||||:...|.:..|..|:|..|..|:.     ..|.|||:
  Rat   103 LDTNIIITEPYFNFTSIQESMNEILFEEYQFQAVLRVNAGALSAHRYFRDNP-----SELCCIIV 162

  Fly   157 DVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQLKELISYRHLNVMDESHVVNQIKEDVCFVA 221
            |.||||||:||:...::..:.|.||::|||.|||.|||:||||.|:||||:||:||:|||||:|:
  Rat   163 DSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYRQLHVMDETHVINQVKEDVCYVS 227

  Fly   222 EDFKQAMQVHYSEEKRREVTVDYVLPDFTTVKRGYVRVPGKPRED-------EEQQQMVSLCNER 279
            :||.:.|.:...:.:...|.:|||||||:|:|:|:.    ||||:       :..:|::.|.|||
  Rat   228 QDFYRDMDIAKLKGEDNTVMIDYVLPDFSTIKKGFC----KPREEMVLSGKYKSGEQILRLANER 288

  Fly   280 FTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRELLLNILIVGGSAQFPGFLPRLKRDLRA 344
            |.|||:||||||||:|::|||||:...::..|.|.......||::.||::.||||..|:..::|.
  Rat   289 FAVPEILFNPSDIGIQEMGIPEAIVYSIQNLPEEMQPHFFKNIVLTGGNSLFPGFRERVYSEVRC 353

  Fly   345 LVPDDLEVSLICPEDPVRYAWYGGKEVATSPNFEEFVYTQDDYEEYG 391
            |.|.|.:||::.||:|:.|:|.|||.::.:.:||:.|.|::||||.|
  Rat   354 LTPTDYDVSVVLPENPITYSWEGGKLISENDDFEDMVVTREDYEENG 400

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arp6	NP_511165.1	ACTIN	3..398	CDD:214592	176/372 (47%)
		COG5277	6..391	CDD:227602	175/370 (47%)
Actr6	XP_006241305.1	COG5277	37..407	CDD:227602	176/372 (47%)
		ACTIN	38..408	CDD:214592	176/372 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166338777
Domainoid	1	1.000	383	1.000	Domainoid score	I792
eggNOG	1	0.900	-	-		E1_KOG0680
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H6451
Inparanoid	1	1.050	382	1.000	Inparanoid score	I1978
OMA	1	1.010	-	-		QHG54227
OrthoDB	1	1.010	-	-		D462325at33208
OrthoFinder	1	1.000	-	-		FOG0005146
OrthoInspector	1	1.000	-	-		oto97906
orthoMCL	1	0.900	-	-		OOG6_103780
Panther	1	1.100	-	-	LDO	PTHR11937
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X3663
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	16	15.770