DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp6 and Actl9b

DIOPT Version :10

Sequence 1:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_001013915.1 Gene:Actl9b / 292516 RGDID:1359476 Length:411 Species:Rattus norvegicus


Alignment Length:396 Identity:102/396 - (25%)
Similarity:175/396 - (44%) Gaps:50/396 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VVLDNGAHTAKVGLANQDEPHVVPNCIMKAKSERR--------RAFVGNQIDECRDTSALYYILA 62
            ||:|.|....|:|.|.|..|..:...|:..:.:||        ..|:|.......:.:.::.:  
  Rat    47 VVIDMGTGICKMGFAGQTRPTYIVRNIVGCQPKRRTTMEQPKMEMFIGEAAHARPELTLMHPV-- 109

  Fly    63 FQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYK 127
             :.|.:::|...:.:|.:|...| :....::..::.|:|..|..|.:|..:|:.||......:|.
  Rat   110 -RNGIVVDWEAAEFIWRHILEND-LRLDTQDHPLLFTDPPFNPASNREKLVEVAFESLHSPAIYV 172

  Fly   128 TTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQL 192
            .:.:.|:.:   |:..       :|.:::|.|:..::.||...|..:..||:|:|:.|..||..|
  Rat   173 ASQSVLSVY---ANGR-------VNGLVVDTGHGVSYTVPVFQGYNLPSGIQRMDLAGHYLTKFL 227

  Fly   193 KELISYRHLNVMDES-HVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVTVDYVLPDFTTVKRGY 256
            .|.|......|..|. ..:..||:..|:||.|| |..|....|:.||.:.    |||        
  Rat   228 AEKILRSSFAVKKEDMDTMENIKQQYCYVALDF-QKEQGRPDEKFRRCLK----LPD-------- 279

  Fly   257 VRVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDI-GVQQVGIPEAVADCLKACPWEAHRELLL 320
                         .||:::..|.|..|||||:|.|. |...:|:|..|...|...|.|...::..
  Rat   280 -------------GQMITVGKELFQCPELLFHPPDTSGPSSLGLPSMVEHSLSTVPQELRADMEQ 331

  Fly   321 NILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYGGKEVATSPNFEEFVYTQD 385
            |:|:.|||:.|.||..|.|.:|...:..:..|.::...:.....|.||..:|:...|:.....::
  Rat   332 NVLLCGGSSLFTGFEGRFKTELLRRLGPEAHVVVVAQANRNLSVWIGGSILASLCAFQTRWVLRE 396

  Fly   386 DYEEYG 391
            .|||:|
  Rat   397 QYEEHG 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp6NP_511165.1 ASKHA_NBD_Arp6 5..391 CDD:466816 101/394 (26%)
Actl9bNP_001013915.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
ASKHA_ATPase-like 47..410 CDD:483947 102/396 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.