DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp6 and Actr3b

DIOPT Version :10

Sequence 1:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_001004365.1 Gene:Actr3b / 242894 MGIID:2661120 Length:418 Species:Mus musculus


Alignment Length:438 Identity:119/438 - (27%)
Similarity:192/438 - (43%) Gaps:95/438 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VLDNGAHTAKVGLANQDEPH-VVPNCIMKAKSER------RRA---------FVGNQIDECRDTS 55
            |:|.|....|:|.|...||. ::|:||...:|.:      ||.         |:|   ||..|..
Mouse     9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIG---DEAIDKP 70

  Fly    56 ALYYILAFQRGYLLNW-----HTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEI 115
            ........:.|.:.:|     ..::.|:.|:.::.      |:...::|||.:|....:|...||
Mouse    71 TYATKWPIRHGIVEDWDLMERFMEQVVFKYLRAEP------EDHYFLMTEPPLNTPENREYLAEI 129

  Fly   116 LFEEYKVDGVYKTTAADLA-AFNYVA-DSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGI 178
            :||.:.|.|:|....|.|| |.::.: ...|||    |..|:||.|...|||:|...|..:...|
Mouse   130 MFESFNVPGLYIAVQAVLALAASWTSRQVGERT----LTGIVIDSGDGVTHVIPVAEGYVIGSCI 190

  Fly   179 RRIDMGGKALTNQLKELISYRHLNVMDES--HVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVT 241
            :.|.:.|:.:|..:::|:..|.:.:..|.  .....|||..|                       
Mouse   191 KHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYC----------------------- 232

  Fly   242 VDYVLPDFTTVKRGYVRVPGKPREDEEQQQMVSLCN----------ERFTVPELLFNPSDIGVQ- 295
              |:.||   :.|.:.:....||:..:|...::..|          |||..||:.|:|...... 
Mouse   233 --YICPD---IVREFAKYDVDPRKWIKQYTGINAINQKKFIIDVGYERFLGPEIFFHPEFANPDF 292

  Fly   296 QVGIPEAVADCLKACPWEAHRELLLNILIVGGSAQFPGFLPRLKRDLRALVPDDLEVS------L 354
            ...|.:.|.:.:::||.:..|.|..|:::.|||..|..|..||:|||:.:|...|::|      .
Mouse   293 MESISDVVDEVIQSCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLKLSQELSGGR 357

  Fly   355 ICPEDPV----------RYA-WYGGKEVATSPNFEEFVYTQDDYEEYG 391
            |.|: ||          ||| |:||..:|::|.|.:..:|:.||||||
Mouse   358 IKPK-PVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYG 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp6NP_511165.1 ASKHA_NBD_Arp6 5..391 CDD:466816 117/436 (27%)
Actr3bNP_001004365.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 119/438 (27%)

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