DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp6 and arx-2

DIOPT Version :10

Sequence 1:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_505657.1 Gene:arx-2 / 179440 WormBaseID:WBGene00000200 Length:395 Species:Caenorhabditis elegans


Alignment Length:415 Identity:101/415 - (24%)
Similarity:177/415 - (42%) Gaps:67/415 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VVVLDNGAHTAKVGLANQDEP-HVVPNCIMK---------AKSERRRAFVGNQIDECRDTSALYY 59
            |:|:|||....|.|.|..:.| |:.|:.:.:         ...|.:...||.:..:.|....:.|
 Worm     8 VIVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQMLDINY 72

  Fly    60 ILAFQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDG 124
              ....|.:.||.....|||:.|..:.:....:...:::|||.:|..|.:|...:::||:|..:.
 Worm    73 --PMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNS 135

  Fly   125 VYKTTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALT 189
            :|....|.|..:          ....|..:::|.|...||:.|...|..:....||:|:.|:.:|
 Worm   136 IYVAVQAVLTLY----------AQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDIT 190

  Fly   190 NQLKELISYR--HLNVMDESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVTV---DYVLPDF 249
            ..|.:|:..|  :.|...:...|.|:||.:|::|.|.:|      .|....|.||   .|.|||.
 Worm   191 KYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQ------EERLALETTVLSQQYTLPDG 249

  Fly   250 TTVKRGYVRVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEA 314
            ..::.|                     .|||..||:||.|..|.|::.|:.|.:..|::|...:.
 Worm   250 RVIRLG---------------------GERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDT 293

  Fly   315 HRELLLNILIVGGSAQFPGFLPRLKRDLRALVPD-----------DLEVSLICPEDPVRYAWYGG 368
            ..:...:|::.||:..:||...||:::|:.|..|           ..::.:..|.......:.||
 Worm   294 RLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGG 358

  Fly   369 KEVAT--SPNFEEFVYTQDDYEEYG 391
            ..:|.  ....::|..::.:|||.|
 Worm   359 AVLANLMKDRDQDFWVSKKEYEEGG 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp6NP_511165.1 ASKHA_NBD_Arp6 5..391 CDD:466816 100/413 (24%)
arx-2NP_505657.1 ASKHA_NBD_Arp2 7..390 CDD:466821 101/415 (24%)

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