Protein Alignment Arp6 and swsn-6

DIOPT Version :9

• Sequence 1: NP_511165.1
• Gene: Arp6 / 32514
• FlyBaseID: FBgn0011741
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: NP_500801.2
• Gene: swsn-6 / 177325
• WormBaseID: WBGene00022774
• Length: 436
• Species: Caenorhabditis elegans
• Alignment Length: 479
• Identity: 95/479 - (19%)
• Similarity: 179/479 - (37%)
• Gaps: 140/479 - (29%)

  Fly     1 MANAV--------VVLDNGAHTAKVGLANQDEPH-VVPNCI----------------------MK 34
            |:.||        :|.|.|:.:.:||.|.::.|. .:|:.|                      .|
 Worm     1 MSGAVYGGDEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSK 65

  Fly    35 AKSER-RRAFVGNQ---IDECRDTSALYYILAFQRGYLLNWHTQKTVWDYIFSKDGIGCSLEN-- 93
            .:::| :..|:|..   :...|.....:    .:.|.:.:|...:.:.::         |.||
 Worm    66 VQTKREKNFFIGTTKIIVPRARTNMESF----MKEGLIEDWELFEKIVEH---------SYENIL 117

  Fly    94 ------RNIVITEPQMNFQSIQEATLEILFEEYKVDGVYKTTAADLAAFNYVADSEERTTMESLN 152
                  ..::.:|...|.::.:|...||:||:::|...|.:....|:.|     ::.||     :
 Worm   118 YSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCF-----AQGRT-----H 172

  Fly   153 CIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQLKELISYRHLNVMDESHVVNQIKEDV 217
            .:::|.|.:.|.|||...|..|...:.:..:||..:|.||.:::..:.::|:....:..  ||:|
 Worm   173 GLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQKIDVIPTYRIGG--KEEV 235

  Fly   218 CFVAEDFKQAMQVHYSEEKRREVTVDYVLPDFTTVKRGYVRVPGKPREDEEQQQMVSLCN----- 277
                           :|.:..:.|....||..|   :.|.....|...::....|:.||:
 Worm   236 ---------------NEGEAPKWTPRKNLPQVT---KSYDAFMKKMLLEDMAATMLQLCDTSIDM 282

  Fly   278 -----------------------ERFTVPELLFNPSDIG-------------VQQVGIPEA-VAD 305
                                   ||..:||.||   |:|             |.|:....| :||
 Worm   283 DYVDKLPSTPYAFPNGYTKEFGAERIKLPECLF---DLGYLKAEGKKDGLMTVAQMAAASANLAD 344

  Fly   306 CLKACPWEAHRELLLNILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSLI-CPEDPVRY--AWYG 367
            .      :....|..|:.:.||::...||..||...|....|..:::.:. .|....|.  ||.|
 Worm   345 I------DIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIG 403

  Fly   368 GKEVATSPNFEEFVYTQDDYEEYG 391
            |..:.:...|::...::.:|:|.|
 Worm   404 GSILGSLGTFQQMWVSKAEYDESG 427

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arp6	NP_511165.1	ACTIN	3..398	CDD:214592	94/477 (20%)
		COG5277	6..391	CDD:227602	91/464 (20%)
swsn-6	NP_500801.2	NBD_sugar-kinase_HSP70_actin	10..435	CDD:302596	92/470 (20%)
		Actin	11..436	CDD:278451	92/469 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D649708at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010