DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp6 and ACTRT1

DIOPT Version :10

Sequence 1:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_612146.1 Gene:ACTRT1 / 139741 HGNCID:24027 Length:376 Species:Homo sapiens


Alignment Length:403 Identity:96/403 - (23%)
Similarity:185/403 - (45%) Gaps:50/403 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VVLDNGAHTAKVGLANQDEP-HVVPNCIMKAKSE------RRRAFVGNQIDECRDTSALYYILAF 63
            |:.|||:...|.||:.:..| ||:.:.:...|..      .::.|||.:.....:...|:|  ..
Human    12 VIFDNGSGLCKAGLSGEIGPRHVISSVLGHCKFNVPLARLNQKYFVGQEALYKYEALHLHY--PI 74

  Fly    64 QRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYKT 128
            :||.:..|...:.:|.::|.:: :|.....:.:::|||.:|.:.|:|...|::||.:.|.|.|.:
Human    75 ERGLVTGWDDMEKLWKHLFERE-LGVKPSQQPVLMTEPSLNPREIREKLAEMMFETFSVPGFYLS 138

  Fly   129 TAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQLK 193
            ..|..|.:          ....:..:::|.|...|..||...|..:...:.::.|.|:.:|..|.
Human   139 NHAVAALY----------ASACVTGLVVDSGDGVTCTVPIFEGYSLPHAVTKLCMAGRDITEHLT 193

  Fly   194 ELISYRHLN---VMDESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVTVDYVLPDFTTVKRG 255
            .|:.....|   ::::: |||.|||.:|::|.:.::.::     :.|.||...|.|||      |
Human   194 RLLFASGFNFPCILNKA-VVNNIKEKLCYIALEPEKELR-----KSRGEVLGAYRLPD------G 246

  Fly   256 YVRVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRELLL 320
            :|               :...:|.:.|||:||.|..:|:...|:.:.|:..:..|..:...:|..
Human   247 HV---------------IHFGDELYQVPEVLFAPDQLGIHSPGLSKMVSSSIMKCDTDIQNKLYA 296

  Fly   321 NILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYGGKEVATSPNFEEFVYTQD 385
            :|::.||:...||...||.:::..|......:.:....|....||.|...:.:..:|::...|..
Human   297 DIVLSGGTTLLPGLEERLMKEVEQLASKGTPIKITASPDRCFSAWIGASIMTSMSSFKQMWVTSA 361

  Fly   386 DYEEYGFQGINQR 398
            |::|||...:.:|
Human   362 DFKEYGTSVVQRR 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp6NP_511165.1 ASKHA_NBD_Arp6 5..391 CDD:466816 93/394 (24%)
ACTRT1NP_612146.1 ASKHA_NBD_actin_Arp-T1-3 10..367 CDD:466848 93/394 (24%)

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