DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp6 and Acte1

DIOPT Version :9

Sequence 1:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_001356763.1 Gene:Acte1 / 102636989 MGIID:2685344 Length:382 Species:Mus musculus


Alignment Length:413 Identity:94/413 - (22%)
Similarity:170/413 - (41%) Gaps:62/413 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MANAVVVLDNGAHTAKVGLANQDEPHVV---------------PNCIMKAKSE---RRRAFVGNQ 47
            |....:|.|.|:..:|||.:....|..|               |.|:.:...|   .:..|:|.:
Mouse     1 MEKTPLVCDYGSGFSKVGFSGTQAPQAVFPTILGKMKHTGLSGPACVFQNVLEGLGEQDWFIGAE 65

  Fly    48 IDECRDTSALYYILAFQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEAT 112
            ....|....:||.::  ||.:.||...:.:|.|.| ...:..:.|...|:|||..:..:..:...
Mouse    66 TQTNRTELNMYYPIS--RGAITNWDNVEKIWHYSF-YHSLQIAPEQHPILITEAPLTSKEAKSRM 127

  Fly   113 LEILFEEYKVDGVYKTTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQG 177
            .:||||.:....:|   .|:.|..:.:|......|       .|:.|...|:.||.:.|..:...
Mouse   128 TQILFETFNFPALY---TANQAVLSLIASGRTSGT-------AIESGDGMTYFVPVMNGYPLHLS 182

  Fly   178 IRRIDMGGKALTNQLKELISYRHLNVMD---ESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRRE 239
            ..::|:.|:.||..|.:|:| .:.||::   :...:..:|:...:||.|:...|    |:.....
Mouse   183 TTKLDIAGQDLTLYLMKLLS-DNGNVLETIADLEYIRDLKDKYSYVALDYNMEM----SKTSAPS 242

  Fly   240 VTVDYVLPDFTTVKRGYVRVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVA 304
            ....:.|||            ||.         ::|..|.|...|:||:.|.:.....||.....
Mouse   243 FQKKFTLPD------------GKE---------INLGQEAFMCSEVLFDTSLLERANPGIHMLTL 286

  Fly   305 DCLKACPWEAHRELLLN-ILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYGG 368
            :.:.:|. ::|:..|.| |::.||::...|...|:::::..:|..|..|.:.........||.|.
Mouse   287 ESIMSCE-KSHQRTLFNYIVLTGGTSACTGLRFRMQKEMAKVVSPDFCVKVTASPYAKYSAWIGA 350

  Fly   369 KEVATSPNFEEFVYTQDDYEEYG 391
            ..:::.|.|::...|..:|.|.|
Mouse   351 SILSSLPLFKDMWITNHEYLEIG 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp6NP_511165.1 ACTIN 3..398 CDD:214592 93/411 (23%)
COG5277 6..391 CDD:227602 92/406 (23%)
Acte1NP_001356763.1 NBD_sugar-kinase_HSP70_actin 2..382 CDD:354300 93/412 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.