DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp6 and LOC102552318

DIOPT Version :10

Sequence 1:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster
Sequence 2:XP_038957224.1 Gene:LOC102552318 / 102552318 RGDID:7506405 Length:383 Species:Rattus norvegicus


Alignment Length:388 Identity:99/388 - (25%)
Similarity:163/388 - (42%) Gaps:53/388 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VGLA----NQDEPHVVPNCI-----MKAKSERRRAFVGNQIDECRDTSALYYILAFQRGYLLNWH 72
            ||||    ::.:.:|..:.:     :..:.|....|:|.::...|....::|.:.  ||.:.||.
  Rat    27 VGLAPALGSRSDSYVQDSLLPFLQTLLERLEEEDWFIGAEVQNNRPKLNIHYPIF--RGAITNWD 89

  Fly    73 TQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYKTTAADLAAFN 137
            ..:.||.|.| ...:..:.|...|::|:|.:..:..:....:||||.:....:|......|:.  
  Rat    90 NVQKVWHYSF-YHYLRIAPEQHPILVTDPPLTTKEARSKMTQILFETFNFPALYLANQGVLSL-- 151

  Fly   138 YVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQLKELISYRHLN 202
            |.:.....||:||        |...|:.||...|..:.....::|..|:.||..|.:|:| .:.|
  Rat   152 YASGRTSGTTIES--------GDGMTYFVPIANGYPLHLSTTKVDTAGQDLTVYLMKLLS-DNGN 207

  Fly   203 VM----DESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVTVDYVLPDFTTVKRGYVRVPGKP 263
            ::    |..| |..:||..|:||.|:...|    |:.........:.|||            ||.
  Rat   208 MLETTADLEH-VRDLKEKCCYVALDYDMEM----SKTSESSFLKKFTLPD------------GKE 255

  Fly   264 REDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRELLLNILIVGGS 328
                     :||..|.|..||:|||||.:|....||.......:.:|.....|.|...|::.||:
  Rat   256 ---------ISLGQETFMCPEVLFNPSLVGKNYPGIDMQAQQSITSCDKSHWRNLFGYIILSGGT 311

  Fly   329 AQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYGGKEVATSPNFEEFVYTQDDYEEYG 391
            ....|...||:|::..||..:|.|.::........||.|...:.:.|.|::...|..:|.|.|
  Rat   312 GTCSGLRFRLQREIAKLVSPELSVKVVTSPYAKYGAWVGASILCSLPMFKDMWITNHEYLEIG 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp6NP_511165.1 ASKHA_NBD_Arp6 5..391 CDD:466816 98/386 (25%)
LOC102552318XP_038957224.1 ASKHA_ATPase-like 58..374 CDD:483947 92/355 (26%)

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