DRSC/TRiP Functional Genomics Resources

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Protein Alignment MagR and Isca1

DIOPT Version :9

Sequence 1:NP_001259579.1 Gene:MagR / 32513 FlyBaseID:FBgn0026666 Length:131 Species:Drosophila melanogaster
Sequence 2:NP_853657.1 Gene:Isca1 / 290985 RGDID:727792 Length:129 Species:Rattus norvegicus


Alignment Length:123 Identity:96/123 - (78%)
Similarity:109/123 - (88%) Gaps:1/123 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ATVRAVKGRKLIPTRAALTLTPAAVLRIKTLLQDKPDMVGLKVGVRQRGCNGLSYTLDYASQKAD 73
            ||||||..|||.||||||||||:||.:||.||:|||:.||||||||.||||||||:|:|...|.|
  Rat     8 ATVRAVSKRKLQPTRAALTLTPSAVNKIKQLLKDKPEHVGLKVGVRTRGCNGLSYSLEYTKTKGD 72

  Fly    74 KLDEEVVQDGVKVFIDKKAQLSLLGTEMDFVESKLSSEFVFNNPNIKGTCGCGESFSM 131
             .||||:||||:|||:|||||:|||||||:||.|||||||||||||||||||||||::
  Rat    73 -ADEEVIQDGVRVFIEKKAQLTLLGTEMDYVEDKLSSEFVFNNPNIKGTCGCGESFNV 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MagRNP_001259579.1 TIGR00049 27..130 CDD:272875 80/102 (78%)
Isca1NP_853657.1 TIGR00049 26..129 CDD:272875 81/103 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341725
Domainoid 1 1.000 166 1.000 Domainoid score I3806
eggNOG 1 0.900 - - E1_COG0316
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H87862
Inparanoid 1 1.050 193 1.000 Inparanoid score I3769
OMA 1 1.010 - - QHG54692
OrthoDB 1 1.010 - - D1578799at2759
OrthoFinder 1 1.000 - - FOG0000696
OrthoInspector 1 1.000 - - oto95544
orthoMCL 1 0.900 - - OOG6_101081
Panther 1 1.100 - - LDO PTHR10072
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1490
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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