DRSC/TRiP Functional Genomics Resources

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Protein Alignment HUWE1 and ube3a

DIOPT Version :10

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:NP_001007319.1 Gene:ube3a / 792398 ZFINID:ZDB-GENE-041114-190 Length:857 Species:Danio rerio


Alignment Length:1110 Identity:238/1110 - (21%)
Similarity:403/1110 - (36%) Gaps:360/1110 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  4085 DDHPAPKPSVPLDEAPSTSKAAAAKAAATAKVSTAGSQNKHSVPYQTNAKNFWDVVLNIDQQTQV 4149
            |.||:.|      .|.|.....:||.|......:.|..|...:|  ...::|.|  ||.      
Zfish    61 DPHPSKK------GASSAFPENSAKGAHNFSACSNGKMNHKDLP--PTREDFRD--LNF------ 109

  Fly  4150 RLANVAQFPLTSQPAWEWQ---PNTADFLSFSESPFGQLLEMLPYKVICRSPHLTDMLVKLLASL 4211
                     ||....:|..   ..|.|:     ||.        .:||.|.....:.||:.....
Zfish   110 ---------LTEDKVYEILSICSETEDY-----SPL--------IRVIGRVFSSAESLVQSFRKA 152

  Fly  4212 STELPKEEELLPLSDQMPPLVPIGPVQRAGAAAAAAHPPPPQPPAENTATATEIGDGLAANIEEQ 4276
            .....:|.:.|...|:                           ..:.....|..|...|..:|.:
Zfish   153 KQHTKEELKSLQAKDE---------------------------DKDEDEKETASGSSTAMEVEPE 190

  Fly  4277 ASPASGNPAS-GDSNAGAKRTQLPTLSVALPVTPSKPRRKIYSKNFSQLQLVIEVLTHQCGTTEG 4340
            ||.:||:.:| |::|.    .:|..:.|::.:...   |::|.:..|                  
Zfish   191 ASASSGDGSSHGENNV----QKLGPVEVSVDIDAV---RRVYDRLLS------------------ 230

  Fly  4341 LDNVAKLIVNLTQCSQASSAIFIQYLTAAILGLAEEVRQAIQMLLNEIRMYNIHQGGAGTTSQAA 4405
                          ::...|.|:.    |::.|:..|.       .::..:|::           
Zfish   231 --------------NEKIEAAFLN----ALVYLSPNVE-------CDLTYHNVY----------- 259

  Fly  4406 STSGAAAATASYVPTVSGASLLPNLAVHEGIMQDRFTAEHVIISAPKNAKPTCELQLPSMKKL-- 4468
                  ||..:|:...  ..::.|..:|        :.|::.|:.|:..|...:|.||::.||  
Zfish   260 ------AADPNYLNVF--IIVMENSNLH--------SPEYLEIALPQFCKAMSKLPLPALAKLAR 308

  Fly  4469 MSNSSAQPYFLRTLKIFMQVRDMYEAQNGLSTGGGVACGAGDNDDD-------IIDIEGDGGASG 4526
            :.:........|.::.|.|:.......|..|:...|      |:||       .:.|.......|
Zfish   309 LWSQYGVDQIRRLVETFQQLITYTVISNEFSSDNLV------NEDDGVVAATKCLKIVYYANVLG 367

  Fly  4527 GSSSDMAPGSASTISPPPPMETNQIAQDGDDDEEDDDEARSFPGVGNHAVASASKSTKPTLSQIL 4591
            |   |:                     |.|.:||||||             ...:|::.||.::|
Zfish   368 G---DL---------------------DTDHNEEDDDE-------------PIPESSELTLQELL 395

  Fly  4592 CLDVLWNTLSECLVALEESKDEFAVLVLQPTVEAFFLIHASHRGASKKSGRSFMPNAAGFGLRAA 4656
            .               ||.::                          |.|....|.....|:|  
Zfish   396 G---------------EERRN--------------------------KKGPRVDPLETEMGIR-- 417

  Fly  4657 AGAGAIGGLGAAAPSAQEYSPFMDDVSSANTPSS---------ASFDDEPRMQDASTNTPLVTNP 4712
                       |:...:...||.:.:   |.|.:         ..|..|...:.:....|.:.|.
Zfish   418 -----------ASDCRKPLIPFEEFI---NEPLNEVLEMDKDYTFFKVETESKFSFMTCPFILNA 468

  Fly  4713 STSTAMSAHEAQLRQDRQKFLQFAEKHRTVLNQILRQSPTHLSDGPFAVLVDHTRILDFDVKRKY 4777
            .|......::.::|       .::|:..|.|                                 |
Zfish   469 VTKNLGLYYDNRIR-------MYSERRITAL---------------------------------Y 493

  Fly  4778 FQTELERLDEGIRREEHTVSVRRVTVFEDSFRVLYRL------GPEEWKNRFYIVFEDEEGQDAG 4836
            ...:.::|:..:|     :.|||..:.:|:   |.||      .|.:.|.:.|:.||.|:|.|.|
Zfish   494 SLVQGQQLNPYLR-----LKVRRDHIIDDA---LVRLEMIAMENPADLKKQLYVEFEGEQGVDEG 550

  Fly  4837 GLLREWYVIISREIFNPMYALFCVSPGDRVTYMINPSSHANPNHLSYFKFVGRVIAKAVHDNKLL 4901
            |:.:|::.::..|||||...:|......:: :..||||..|...   |..:|.|:..|:::|.:|
Zfish   551 GVSKEFFQLVVEEIFNPDIGMFTYDESTKL-FWFNPSSFENEGQ---FTLIGIVLGLAIYNNCIL 611

  Fly  4902 ECYFTRSFYKHILGKQVKHTDMESQDYEFYKGLDYLMKNDISTLGYE--------LTFS-TEVQE 4957
            :.:|....|:.::||:....|:.......::.|..||:       ||        :||. ::...
Zfish   612 DVHFPMVIYRKLMGKKGTFRDLADSHPVLFQSLKDLME-------YEGNVEEDMMITFQISQTDL 669

  Fly  4958 FGVTQIRDLKPNGRDTAVTEENKFEYVQLVCQLKMSGSIRQQLDAFLEGFYDIIPKHLIS----- 5017
            ||...:.|||.:|....||.||:.::|.|..:..::.|:.:|..||..||      |:::     
Zfish   670 FGNPLMYDLKESGDKIPVTNENRKDFVALYAEYMLNKSVEKQFKAFRRGF------HMVTNESPL 728

  Fly  5018 --IFNEQELELLISGLPDIDIEDLKANTEYH-KYTSKSAQIQWFWRALRSFDQADRAKFLQFVTG 5079
              :|..:|:||||.|..::|.:.|:.:|||. .|...|..|:.||..:.||:|..:..||||.||
Zfish   729 KYLFRPEEIELLICGSRNLDFQALEESTEYDGGYNKDSRIIRDFWETVHSFEQEKKRLFLQFTTG 793

  Fly  5080 TSKVPLQGFGSLEGMNGIQKFQIHRDDRSTDRLPCAHTCFNQLDLPMYKSYDKLRSCLLKAIHEC 5144
            |.:.|:.|.|.|       |..|.::...:||||.:|||||.|.||.|.:.:||:..||||| ..
Zfish   794 TDRAPVGGLGKL-------KMIIAKNGPDSDRLPTSHTCFNVLLLPEYSTVEKLKERLLKAI-TY 850

  Fly  5145 SEGFG 5149
            ::|||
Zfish   851 AKGFG 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:428721
DUF913 621..989 CDD:461803
UBA_like_SF 1467..1506 CDD:473871
WWE 1756..1828 CDD:128922
DUF5585 3288..3672 CDD:465521
UBM 3670..3700 CDD:464159
UBM 3719..3746 CDD:464159
HECTc 4796..5149 CDD:238033 120/375 (32%)
ube3aNP_001007319.1 AZUL 6..60 CDD:465173
HECTc 505..855 CDD:238033 121/382 (32%)
Blue background indicates that the domain is not in the aligned region.

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