DRSC/TRiP Functional Genomics Resources

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Protein Alignment HUWE1 and Smurf1

DIOPT Version :9

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:XP_006504947.1 Gene:Smurf1 / 75788 MGIID:1923038 Length:757 Species:Mus musculus


Alignment Length:465 Identity:176/465 - (37%)
Similarity:261/465 - (56%) Gaps:49/465 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  4701 DASTNTPLVTNPSTSTAMSAHEAQLRQDRQKFLQFAEKHRTVLNQILRQSPTHL-SDGPFAVLVD 4764
            |.:..|...|:|.....|: |:.||::..|                    |..| |:|       
Mouse   326 DHNNRTTQFTDPRLHHIMN-HQCQLKEPSQ--------------------PLQLPSEG------- 362

  Fly  4765 HTRILDFDVKRKYFQTELERLDEGIRRE---------EHTVSVRRVTVFEDSFRVLYRLGPEEWK 4820
              .:.|.::..:.::.:|.:..:.:|.|         ...:.|.|..:||:|:|.:.::.|::.|
Mouse   363 --SVEDEELPAQRYERDLVQKLKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLK 425

  Fly  4821 NRFYIVFEDEEGQDAGGLLREWYVIISREIFNPMYALFCVSPGDRVTYMINPSSHANPNHLSYFK 4885
            .|..:.|..|||.|.||:.|||..::..|:.||.|.||..|..:..|..|||.|..||:|||||.
Mouse   426 KRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFH 490

  Fly  4886 FVGRVIAKAVHDNKLLECYFTRSFYKHILGKQVKHTDMESQDYEFYKGLDYLMKNDISTLGYELT 4950
            ||||::..||.....:...||..|||.:|||.::.:|:||.|.|.:|.|.::::|||:.: .:.|
Mouse   491 FVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPV-LDHT 554

  Fly  4951 FSTEVQEFGVTQIRDLKPNGRDTAVTEENKFEYVQLVCQLKMSGSIRQQLDAFLEGFYDIIPKHL 5015
            |..|...||.....:||||||:..||||||.|||:|....:....|..|..|..:||.::||:||
Mouse   555 FCVEHNAFGRILQHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHL 619

  Fly  5016 ISIFNEQELELLISGLPDIDIEDLKANTEYHKYTSKSAQIQWFWRALRSFDQADRAKFLQFVTGT 5080
            :..|:::||||:|.||..||:.|.|:||......:.|..::|||:|:.:||:..||:.||||||:
Mouse   620 LKPFDQKELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGS 684

  Fly  5081 SKVPLQGFGSLEGMNGI---QKFQIHRDDRSTDRLPCAHTCFNQLDLPMYKSYDKLRSCLLKAIH 5142
            ::||||||.:|:|..|.   :.|.||..|.:||.||.||||||::|:|.|:||:||...||.|:.
Mouse   685 TRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVE 749

  Fly  5143 E-CSEGFGFA 5151
            | |    |||
Mouse   750 ETC----GFA 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:283630
DUF913 621..989 CDD:283642
UBA_like_SF 1467..1506 CDD:304366
WWE 1756..1828 CDD:128922
40S_SA_C 3575..3651 CDD:292740
DUF4414 3675..3779 CDD:291075
HECTc 4796..5149 CDD:238033 156/356 (44%)
HECTc 4820..5148 CDD:214523 149/331 (45%)
Smurf1XP_006504947.1 C2_Smurf-like 14..138 CDD:176028
WW 236..267 CDD:197736
WW 307..339 CDD:197736 4/12 (33%)
HECTc 399..754 CDD:238033 156/359 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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