DRSC/TRiP Functional Genomics Resources

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Protein Alignment HUWE1 and Herc3

DIOPT Version :10

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:NP_082981.3 Gene:Herc3 / 73998 MGIID:1921248 Length:1050 Species:Mus musculus


Alignment Length:469 Identity:118/469 - (25%)
Similarity:207/469 - (44%) Gaps:78/469 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  4699 MQDAST--NTPLVTNPSTSTAMSAHEAQLRQDRQKFLQFAEKHRTVLN--QILRQSPTHLSDGPF 4759
            ||||.|  :.|.:.:....|.|...:|:|:      :|.|.....:.|  .:|...|. |:..||
Mouse   644 MQDAVTLCSYPFIFDAQAKTKMLQTDAELQ------MQVAVNGANLQNVFMLLTLEPL-LARSPF 701

  Fly  4760 AVLVDHTRILDFDVKRKYFQTELERLDEGIRREEHTV--SVRRVTVFEDSFRVLYRLGPEEWKNR 4822
            .||  |.                        |..|.|  ::|.:::..|.          :.|..
Mouse   702 LVL--HV------------------------RRNHLVGDALRELSIHSDI----------DLKKP 730

  Fly  4823 FYIVFEDEEGQDAGGLLREWYVIISREIFNPMYALFCVSPGDRVTYMINPSSHANPNHLSYFKFV 4887
            ..::|:.|||.||||:.:|:::::.:|:.||:|.:|.......:.:.   |......| ::|..:
Mouse   731 LKVIFDGEEGVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDSNLLWF---SDTCFVEH-NWFHLI 791

  Fly  4888 GRVIAKAVHDNKLLECYFTRSFYKHILG--------KQVKHTDMES-QDYEFYKGLDYLMKNDIS 4943
            |.....|::::.:::.:|..:.||.:|.        |::..|:..| |:...|.|      .||.
Mouse   792 GITCGLAIYNSTVVDLHFPLALYKKLLNVKPSLEDLKELSPTEGRSLQELLDYPG------EDIE 850

  Fly  4944 TLGYELTFSTEVQEFGVTQIRDLKPNGRDTAVTEENKFEYVQLVCQLKMSGSIRQQLDAFLEGFY 5008
            .. :.|.|:...:.:||.:.:.|.|.|...||.::|:.|:|..........|:.:...||..||.
Mouse   851 ET-FCLNFTVCRESYGVIEQKKLIPGGDRVAVCKDNRQEFVDAYVNYIFQISVHEWYTAFSSGFL 914

  Fly  5009 DIIPKHLISIFNEQELELLISGLPDIDIEDLKANTEYH-KYTSKSAQIQWFWRALRSFDQADRAK 5072
            .:....::.:|...||..::.|..:.|.|:|:....|. .|:|....::.||.....|....:.|
Mouse   915 KVCGGKVLELFQPAELRAMMVGNSNYDWEELEETAVYRGDYSSTHPTVKLFWETFHEFPLEKKKK 979

  Fly  5073 FLQFVTGTSKVPLQGFGSLEGMNGIQKFQIHRDDRSTDRLPCAHTCFNQLDLPMYKSYDKLRSCL 5137
            ||.|:||:.::|:.|..||:       ..|.......:.||.||||:|.||||.|.|.:.:::.|
Mouse   980 FLLFLTGSDRIPIYGMASLQ-------IIIQSTATGEEYLPVAHTCYNLLDLPKYSSKEIMKARL 1037

  Fly  5138 LKAIHECSEGFGFA 5151
            .:|: :..|||..|
Mouse  1038 TQAL-DNYEGFSLA 1050

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:428721
DUF913 621..989 CDD:461803
UBA_like_SF 1467..1506 CDD:473871
WWE 1756..1828 CDD:128922
DUF5585 3288..3672 CDD:465521
UBM 3670..3700 CDD:464159
UBM 3719..3746 CDD:464159
HECTc 4796..5149 CDD:238033 93/364 (26%)
Herc3NP_082981.3 ATS1 3..341 CDD:444065
RCC1 313..377 CDD:395335
HECTc 702..1048 CDD:238033 98/400 (25%)
Blue background indicates that the domain is not in the aligned region.

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