DRSC/TRiP Functional Genomics Resources

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Protein Alignment HUWE1 and wwtr1

DIOPT Version :9

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:NP_001032785.1 Gene:wwtr1 / 568008 ZFINID:ZDB-GENE-051101-1 Length:391 Species:Danio rerio


Alignment Length:419 Identity:91/419 - (21%)
Similarity:142/419 - (33%) Gaps:104/419 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  3200 PASGSNASATSSSTTSVVGTAAPTATSSIASGLLANAVSAGSGSSSLVVPPVAASATGGTRRSSI 3264
            |.|||::..:|:.:.|:.......:.||.||..|    .|||.|.     |........||..|.
Zfish    53 PDSGSHSRQSSADSGSLPPRVHFRSRSSPASLQL----PAGSVSG-----PSPGRLHSHTRHQSC 108

  Fly  3265 PVLISSTLGPSSASSATSATGNGAT-----SDATTTTGGPTRNFSSVDSNVSSETQ-TTTRPPRQ 3323
            .|.....|.|....:.|.   ||..     .:..||...|.::.:...:.:|...| :.|...:|
Zfish   109 DVAEELPLPPGWEMAFTP---NGQKYFLNHIEKITTWHDPRKSMTPSVAQLSLHNQVSNTASIQQ 170

  Fly  3324 RGGLRQQSQLPFNIYAEIDLTNEQDSEGDRSTSTTTGTAADGAESQSQH---NSSSTAAQVAVPQ 3385
            |.....|..|..|..|.                          :.|.||   .......||.|..
Zfish   171 RSMALSQPNLVLNQQAH--------------------------QQQQQHLQQQQQQVPVQVPVQA 209

  Fly  3386 HQRHPPVPLLPSSGRPSRPHTRLDETELLLLQLTDRQIRNRLQGSSGHTNSSRTSGSALINARPN 3450
            .|:....|::..|.:..:...||...::         .|.|:|         |.....:......
Zfish   210 PQQQSSQPMMNLSAQQHQQKMRLQRIQM---------ERERIQ---------RRQEELMRQEVAL 256

  Fly  3451 RDLPACLQRHDHPAGSIFPRPSANRTPAPTLVSMPTPMSNAALEQLNVTAPDVVR---TDRN--- 3509
            |.||.       .:.::.|...|..:||.:..:||   :|:|...|| :.|...|   ||..   
Zfish   257 RQLPM-------DSDNLPPVAPAIGSPAMSAGNMP---NNSADPFLN-SGPYHSREQSTDSGLGL 310

  Fly  3510 --FALPSSLEVDVDVLPGIVDLPQQEAQPEDDQLLLPPPPPPPPSDTTPLVHAED--DLWPGTVV 3570
              :::|::.|   |.|..:.|:       :..:.::|.....||....|     |  |..|||.|
Zfish   311 GCYSIPTTPE---DFLNNMEDM-------DTGENMVPVSMNVPPQSRFP-----DFLDSMPGTNV 360

  Fly  3571 SAGTREESSAPAVATESTEAVNESNQPEP 3599
            ..||.|.:....:..:....:|:|   ||
Zfish   361 DLGTLEGTDLMPILNDVESVLNKS---EP 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:283630
DUF913 621..989 CDD:283642
UBA_like_SF 1467..1506 CDD:304366
WWE 1756..1828 CDD:128922
40S_SA_C 3575..3651 CDD:292740 5/25 (20%)
DUF4414 3675..3779 CDD:291075
HECTc 4796..5149 CDD:238033
HECTc 4820..5148 CDD:214523
wwtr1NP_001032785.1 WW 115..146 CDD:197736 7/33 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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