DRSC/TRiP Functional Genomics Resources

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Protein Alignment HUWE1 and smurf2

DIOPT Version :10

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:XP_068073413.1 Gene:smurf2 / 563633 ZFINID:ZDB-GENE-030131-1830 Length:775 Species:Danio rerio


Alignment Length:459 Identity:189/459 - (41%)
Similarity:268/459 - (58%) Gaps:25/459 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly  4696 EPRMQDASTNTPLVTNPSTSTAMSAHEAQLRQDRQKFLQFAEKHRTVLNQILRQSPTHLSDGPFA 4760
            :||:   |.|..||.|||.:.:.:|.||   |...:..|..|:.::|:      ||.:|.:.|..
Zfish   337 DPRL---SANLHLVLNPSPNGSRAAVEA---QSSSRPGQLKEQAQSVV------SPGNLPEDPEC 389

  Fly  4761 VLVDHTRILDFDVKRKYFQTELERLDEGIRREEH-TVSVRRVTVFEDSFRVLYRLGPEE-WKNRF 4823
            :.|...: .|...|.|..:.||.:...   :..| .:.|.|..:||:|:|.:.::.|:: || |.
Zfish   390 LTVPKYK-RDLVQKLKILRQELSQQQP---QAGHCRIEVSREEIFEESYRQVMKMRPKDLWK-RL 449

  Fly  4824 YIVFEDEEGQDAGGLLREWYVIISREIFNPMYALFCVSPGDRVTYMINPSSHANPNHLSYFKFVG 4888
            .:.|..|||.|.||:.|||..::|.|:.||.|.||..|..|..|..|||.|..||.|||||.|||
Zfish   450 MVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVG 514

  Fly  4889 RVIAKAVHDNKLLECYFTRSFYKHILGKQVKHTDMESQDYEFYKGLDYLMKNDISTLGYELTFST 4953
            |::..||.....::..||..|||.:|||.:...||||.|.:.:..|.:::.|||:.: .:.||..
Zfish   515 RIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLDDMESVDPDLHNSLVWILDNDITGV-LDHTFCV 578

  Fly  4954 EVQEFGVTQIRDLKPNGRDTAVTEENKFEYVQLVCQLKMSGSIRQQLDAFLEGFYDIIPKHLISI 5018
            |...:|.....:|||||:...||::.|.|||:|....:....|..|..|..:||.::||:||:..
Zfish   579 EHNAYGEIIQHELKPNGKSIPVTQDTKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKA 643

  Fly  5019 FNEQELELLISGLPDIDIEDLKANTEYHKYTSKSAQIQWFWRALRSFDQADRAKFLQFVTGTSKV 5083
            |:|:||||::.||..|||.|.|:||.....|..|..::|||||:.|:|:..||:.||||||:|:|
Zfish   644 FDEKELELIVCGLGKIDINDWKSNTRLKHCTPDSNIVKWFWRAVESYDEERRARLLQFVTGSSRV 708

  Fly  5084 PLQGFGSLEGMNGIQKFQIHRDDRSTDRLPCAHTCFNQLDLPMYKSYDKLRSCLLKAIHE-CSEG 5147
            |||||.:|:|..|.:.|.||:.|.||:.||.||||||::|:|.|:|||||...||.||.| |   
Zfish   709 PLQGFKALQGAAGPRLFTIHQIDASTNNLPKAHTCFNRIDIPPYESYDKLYDKLLTAIEETC--- 770

  Fly  5148 FGFA 5151
             |||
Zfish   771 -GFA 773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:428721
DUF913 621..989 CDD:461803
UBA_like_SF 1467..1506 CDD:473871
WWE 1756..1828 CDD:128922
DUF5585 3288..3672 CDD:465521
UBM 3670..3700 CDD:464159
UBM 3719..3746 CDD:464159
HECTc 4796..5149 CDD:238033 159/354 (45%)
smurf2XP_068073413.1 C2_Smurf-like 13..147 CDD:176028
PRP40 165..>239 CDD:227435
WW 169..198 CDD:459800
WW 262..293 CDD:197736
WW 308..340 CDD:197736 1/2 (50%)
HECTc 420..772 CDD:238033 159/357 (45%)
Blue background indicates that the domain is not in the aligned region.

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