DRSC/TRiP Functional Genomics Resources

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Protein Alignment HUWE1 and Nedd4

DIOPT Version :10

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:NP_648993.1 Gene:Nedd4 / 39958 FlyBaseID:FBgn0259174 Length:1007 Species:Drosophila melanogaster


Alignment Length:1189 Identity:311/1189 - (26%)
Similarity:466/1189 - (39%) Gaps:259/1189 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  4026 LSAVFGMPSPTAGSGGGAGSGSAASGGLTGYDDV---PPGGTLDFRSRFCRYQVVNRLRSIFDDH 4087
            |.|...:|.|:        |.|:.:||     ||   ||      |.|........:.|..|.:.
  Fly     8 LVAAAALPVPS--------SSSSVAGG-----DVPRPPP------RRRAASVAGQQQTRQEFGNG 53

  Fly  4088 PAPKPSVPL--DEAPSTS-KAAAAKAAATAKVSTAGSQNKHSVPYQTNAKNFWDVVLNIDQ---Q 4146
            ..|:.|:..  |...|.. :.......:.||....|:    |.||.....|..:..:|||.   :
  Fly    54 YTPRRSLAAVNDSGDSCHLRIVVLTGQSLAKKDIFGA----SDPYVRIDLNTINGDINIDSVLTK 114

  Fly  4147 TQVRLANVAQFPLTSQPAWEWQPNTADFLSFSESPFGQLLEMLPYKVICRSPHLTDMLVKLLASL 4211
            |:.:..|         |.|     ..:|: |...|..   ..|.::|...:....|..:.::...
  Fly   115 TKKKTLN---------PTW-----NEEFI-FRVKPSE---HKLVFQVFDENRLTRDDFLGMVELT 161

  Fly  4212 STELPKEEELLPLSDQMPPLVP---IGPVQRAGAAAAAAHPPPPQPPAENTATATEIGDGLAANI 4273
            ...||.|:|...:.:|...|.|   :|...|........|                   ......
  Fly   162 LVNLPTEQEGRTIGEQSYTLRPRRSVGAKSRIKGTLRIYH-------------------AFIRET 207

  Fly  4274 EEQASPASGNPASGD------SNAGAKRTQ---LPTLS-VALPVTPSKPRRKIYSKNFSQLQLVI 4328
            .||:.|:||| :.|:      :|||....|   .||.. .||| ...:.|:....:.:       
  Fly   208 REQSEPSSGN-SDGEWEHVEATNAGETSAQPHPFPTGGHDALP-AGWEERQDANGRTY------- 263

  Fly  4329 EVLTHQCGTTEGLDNVAKLIVNLTQCSQASSAIFIQYLTAAILGLAEEVRQAIQMLLNEIRMYNI 4393
             .:.|...||: .|....|..:.:|.:....|...|......:...|..|.|..:..|.|...| 
  Fly   264 -YVNHTARTTQ-WDRPTVLNSHSSQSTDDQLASDFQRRFHISVDDTESGRSADSISHNSIEDNN- 325

  Fly  4394 HQGGAGTTSQAASTSGAAAATASYVPTVSGASLLPNLAVHEGIMQDRF-TAEHVIISAPKNAKPT 4457
            :..|...|.:.|:||.|...|    || :...:|..:|:.....:|:. |.:|..........|.
  Fly   326 NAAGLAYTPKTAATSSAPPNT----PT-NNNGILAQIAMQYRAEEDQDPTVDHTSFVYNSLRHPV 385

  Fly  4458 CELQLPSMKKLMSNSSAQPYFLRTLKIFMQVRDMYEAQNGLS--TGGGVACGAG----------- 4509
            ...|.......:.|.      ||.::....|.|: ...|..:  ..|.:|.|||           
  Fly   386 AHRQPEISATSLQND------LRPVREAPGVPDI-AITNPFTRRAAGNMAGGAGWQQERRRQQMQ 443

  Fly  4510 -------------DNDDDIIDIEGDGGASGGSSSDMAPGSASTISPPPPMETNQIAQ------DG 4555
                         ..:..::|::.                    ....|....|..|      :.
  Fly   444 LHIQQHQQRQQQQQQNRILLDVDH--------------------RQQEPQHRGQRHQQQHRPSNE 488

  Fly  4556 DDDEEDDDEARSFPGVGNHAVASASKSTKPTLSQILCLDVLWNTLSECLVALEESKDEFAVLVLQ 4620
            |.|..|...............:....:..|.:.|        ||..|     ||.......:.:.
  Fly   489 DTDHTDSHNPSDISAPSTRRNSEEDNAAVPPMEQ--------NTGGE-----EEPLPPRWSMQVA 540

  Fly  4621 PTVEAFFLIHASHRGA--SKKSGRSFMPNAAGFGLRAAAGAGAIGGLGAAAPSAQEYSPFMDDVS 4683
            |....||:.|||.|..  ..::||                         |:|...:.....||:.
  Fly   541 PNGRTFFIDHASRRTTWIDPRNGR-------------------------ASPMPNQTRRVEDDLG 580

  Fly  4684 SANTPSSASFDDEPRMQ------DASTNTPLVTNPSTSTAMSAHEAQLRQDRQKFLQFAEKHRTV 4742
                |....:::.....      |.:|.|....:|..|....|.:|                   
  Fly   581 ----PLPEGWEERVHTDGRVFYIDHNTRTTQWEDPRLSNPNIAGQA------------------- 622

  Fly  4743 LNQILRQSPTHLSDGPFAVLVDHTRILDFDVKRKYFQTELERLDEGIRREEHTVSVRRVTVFEDS 4807
                                |.::|  |:..|.:||::.:.:......:.|  :.:||.::.|||
  Fly   623 --------------------VPYSR--DYKQKYEYFKSHIRKPTNVPNKFE--IRIRRTSILEDS 663

  Fly  4808 FRVLYRLGPEE-WKNRFYIVFEDEEGQDAGGLLREWYVIISREIFNPMYALFCVSPGDRVTYMIN 4871
            :|::..:...: .|.:.::.||.|.|.|.|||.|||:.::|:|:|||.|.||..|..|..|..||
  Fly   664 YRIISSVTKTDLLKTKLWVEFEGETGLDYGGLAREWFYLLSKEMFNPYYGLFEYSAMDNYTLQIN 728

  Fly  4872 PSSH-ANPNHLSYFKFVGRVIAKAVHDNKLLECYFTRSFYKHILGKQVKHTDMESQDYEFYKGLD 4935
            ..|. .|..|||||||:||:...||:..|||:.:|.|.|||.:|.|.:...||||.|.|:|..|.
  Fly   729 NGSGLCNEEHLSYFKFIGRIAGMAVYHGKLLDAFFIRPFYKMMLQKPIDLKDMESVDTEYYNSLM 793

  Fly  4936 YLMKNDISTLGYELTFSTEVQEFGVTQIRDLKPNGRDTAVTEENKFEYVQLVCQLKMSGSIRQQL 5000
            ::.:||...|  ||||..:...||.....:|||.|.:..||.|||.||::||.:.:....:::|:
  Fly   794 WIKENDPRIL--ELTFCLDEDVFGQKSQHELKPGGANIDVTNENKDEYIKLVIEWRFVARVKEQM 856

  Fly  5001 DAFLEGFYDIIPKHLISIFNEQELELLISGLPDIDIEDLKANTEYH-KYTSKSAQIQWFWRALRS 5064
            .:||:||..|||.:||.||:|.|||||:.|:.:||::|.:.||.|. .|......|||||||:.|
  Fly   857 SSFLDGFGSIIPLNLIKIFDEHELELLMCGIQNIDVKDWRENTLYKGDYHMNHIIIQWFWRAVLS 921

  Fly  5065 FDQADRAKFLQFVTGTSKVPLQGFGSLEGMNGIQKFQIHRDDRSTDRLPCAHTCFNQLDLPMYKS 5129
            |....|::.||||||||:||:.||..|.|.||.|.|.|.:.. :.:..|.||||||:||||.|:.
  Fly   922 FSNEMRSRLLQFVTGTSRVPMNGFKELYGSNGPQMFTIEKWG-TPNNFPRAHTCFNRLDLPPYEG 985

  Fly  5130 YDKLRSCLLKAIHECSEGF 5148
            |.:|:..|:||| |.|:||
  Fly   986 YLQLKDKLIKAI-EGSQGF 1003

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:428721
DUF913 621..989 CDD:461803
UBA_like_SF 1467..1506 CDD:473871
WWE 1756..1828 CDD:128922
DUF5585 3288..3672 CDD:465521
UBM 3670..3700 CDD:464159
UBM 3719..3746 CDD:464159
HECTc 4796..5149 CDD:238033 161/356 (45%)
Nedd4NP_648993.1 C2_NEDD4_NEDD4L 71..204 CDD:175999 30/173 (17%)
WW 248..277 CDD:459800 7/38 (18%)
HUL4 <523..1003 CDD:227354 192/560 (34%)
Blue background indicates that the domain is not in the aligned region.

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