DRSC/TRiP Functional Genomics Resources

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Protein Alignment HUWE1 and ube3c

DIOPT Version :10

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:NP_956767.2 Gene:ube3c / 393445 ZFINID:ZDB-GENE-040426-1211 Length:1081 Species:Danio rerio


Alignment Length:439 Identity:133/439 - (30%)
Similarity:212/439 - (48%) Gaps:65/439 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  4737 EKHRTVLNQILRQSPTHLSDGPFAVLVDHTRILDFDVKRKYFQ-----TELERLDEGIRREEHTV 4796
            |:|..:|.::           ||        ::.|:.:.|.||     .:.|...||...:...|
Zfish   678 ERHLAILTEL-----------PF--------VVPFEERVKIFQKLIYADKREVQGEGPFLDGVNV 723

  Fly  4797 SVRRVTVFEDSFRVLYRLGPE---EWKNRFYIVF-----EDEEGQDAGGLLREWYVIISREIFNP 4853
            ::||..::||::.   :|.||   :.|.|..:..     .||.|.|.||:.||:...:.:..|||
Zfish   724 TIRRNYIYEDAYD---KLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLKSGFNP 785

  Fly  4854 MYALF-CVSPGDRVTYMINPSSHA----NPNHLSYFKFVGRVIAKAVHDNKLLECYFTRSFYKHI 4913
            ....| ..:.|     ::.||..|    ..:...::.|:||::.||:::|.|:|..|...|...:
Zfish   786 NQGFFKTTNEG-----LLYPSPTAEMLVGESFTRHYYFLGRILGKALYENMLVELPFASFFLSKL 845

  Fly  4914 LGK----QVKHTDMESQDYEFYKGLDYL--MKNDISTLGYELTFSTEVQEFGVTQIRDLKPNGRD 4972
            ||.    .:.|  :.|.|.|.|:.|.:|  .:.|:..||  |.|:....:.|..|:.:|||.|:|
Zfish   846 LGTSADVDIHH--LASLDPEMYRNLLFLKSYEGDVEDLG--LNFTVVNNDLGEAQVVELKPGGKD 906

  Fly  4973 TAVTEENKFEYVQLVCQLKMSGSIRQQLDAFLEGFYDIIPKHLISIFNEQELELLISG--LPDID 5035
            ..||..|:..|:.||...:::..||....||.:|..:::....:.:|::||:::|:||  :| |.
Zfish   907 IPVTTANRIAYIHLVADYRLNKQIRAHCLAFRQGLANVVNLEWLRMFDQQEIQVLVSGAHVP-IC 970

  Fly  5036 IEDLKANTEYH-KYTSKSAQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQGFGSLEGMNGIQK 5099
            :||||..|.|. .|::....|:.||..:.||...::.|.|:|||..|:.||.||..|     ...
Zfish   971 LEDLKRFTNYSGGYSATHPVIKIFWDVVESFSDEEKRKLLKFVTSCSRPPLLGFKEL-----YPA 1030

  Fly  5100 FQIHRDDRSTDRLPCAHTCFNQLDLPMYKSYDKLRSCLLKAIHECSEGF 5148
            |.||......:|||.|.||.|.|.||.:.....:|:.||.|| |.|.||
Zfish  1031 FCIHNGGTDLERLPTASTCMNLLKLPEFCDPQLMRNKLLYAI-ESSAGF 1078

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:428721
DUF913 621..989 CDD:461803
UBA_like_SF 1467..1506 CDD:473871
WWE 1756..1828 CDD:128922
DUF5585 3288..3672 CDD:465521
UBM 3670..3700 CDD:464159
UBM 3719..3746 CDD:464159
HECTc 4796..5149 CDD:238033 121/375 (32%)
ube3cNP_956767.2 IQ 47..64 CDD:197470
HECTc 723..1079 CDD:238033 121/375 (32%)
Blue background indicates that the domain is not in the aligned region.

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