DRSC/TRiP Functional Genomics Resources

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Protein Alignment HUWE1 and CG3356

DIOPT Version :10

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:NP_611896.1 Gene:CG3356 / 37876 FlyBaseID:FBgn0034989 Length:1122 Species:Drosophila melanogaster


Alignment Length:757 Identity:190/757 - (25%)
Similarity:306/757 - (40%) Gaps:190/757 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  4553 QDGDDD-EEDDDEARSFPG---VGNHAVASASKSTKPTLSQILCLDVLWNTLSECLVALEESKDE 4613
            :||||| ||.:||....|.   :......:...|.:.::.:..||      |....:..|..:.:
  Fly   394 RDGDDDSEESEDEDEELPAARTLDYDMEQTCRTSGELSVKERECL------LESIAILNETERVD 452

  Fly  4614 FAVLVLQPTVEAFFLIHA------------SHRGASKK--SGRSFMP---NAAGFGLRAAAGAGA 4661
            |.|..|.|.:|...||:|            .|.....|  ...:|.|   .|..|.|  ||.:..
  Fly   453 FIVQQLDPHIENTHLIYALCEICHNLMIYNKHAVFEYKLLYTLAFTPKFIRAVWFKL--AAESTQ 515

  Fly  4662 IG-----------------GLGAAAPSAQEYS-------PFMDDV------------SSAN---- 4686
            :|                 |:....|....:.       |.:.||            |:.|    
  Fly   516 LGFSAPLTLISKGVVPKHQGVDRTIPLLATFCMLFGRLLPTLHDVEFVENKLLLQVHSTINHVRL 580

  Fly  4687 TPSSAS--FDDEPRMQDASTNTPLVTNPSTSTAMS----------AHEAQLRQDRQKFLQFAEKH 4739
            .|.|.:  ......::|.|.....:..|.|.:.::          |.:.:||..:|.:.......
  Fly   581 MPFSIAEIIQMSKTLKDISMGLVELAFPETRSNLANYRKVLGHTEADDKKLRHQKQIWANLLNVV 645

  Fly  4740 RTVLNQI----LR------------------QSPTHL---------SDGPFAVLVDHTR------ 4767
            ..|||||    ||                  ..||.|         ...||..:.|.||      
  Fly   646 VFVLNQIHTRDLRLGFCPEDHWTVTRLDLPLDRPTDLPLTHSSRLRGIRPFQPIRDFTREDFENG 710

  Fly  4768 -------------------ILDFDVKRKYFQTELE--------RLDEGIRREEHTVSVRRVTVFE 4805
                               ::.|:.:....|:.:.        .:...::.....::|||..::|
  Fly   711 PPMSTKQIRSITILREIPFVVPFNKRVSILQSLVAASKMRVQGNMQAFLQGPSVLITVRRSHLYE 775

  Fly  4806 DSFRVLYRLGPEEWKNRFYIVFE-----DEEGQDAGGLLREWYVIISREIFNPMYALFCVSPGDR 4865
            |::..|......:.:.:|.|.|.     ||.|.|.||:.||:...:.:..|:|....|.|:..::
  Fly   776 DAYDKLRPDNEPDLRFKFRIQFVSSLGLDEAGIDGGGVFREFLSELIKTAFDPNRGFFMVTTDNK 840

  Fly  4866 VTYMINPSSHANPN-------HLSYFKFVGRVIAKAVHDNKLLECYFTRSFYKHILGKQVKHTDM 4923
            :        :.|||       :..::.|:||::.|::::|.|:|......|...:.|   |::|:
  Fly   841 L--------YPNPNVADLFEDYEKHYYFIGRILGKSIYENLLVELPLAEFFLTKLAG---KYSDV 894

  Fly  4924 E-----SQDYEFYKGLDYL--MKNDISTLGYELTFSTEVQEFGVTQIRDLKPNGRDTAVTEENKF 4981
            :     |.|.|.|:.|.||  ...|:|.|  .|.|:......|.|||.:|||.|:...||..|:.
  Fly   895 DIHQLASLDPELYRNLLYLKDYSGDVSEL--NLDFTVASSSLGQTQIVELKPQGQSIPVTNSNRI 957

  Fly  4982 EYVQLVCQLKMSGSIRQQLDAFLEGFYDIIPKHLISIFNEQELELLISG--LPDIDIEDLKANTE 5044
            ||:||:...|::..||:..:||.:|..:::|...:.:|:.:||::||||  :| ||:||||.:.|
  Fly   958 EYLQLIADYKLNVQIRRHCNAFRKGLSNVLPIEWLYMFSNKELQILISGAEIP-IDLEDLKKHCE 1021

  Fly  5045 Y-HKYTSKSAQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQGFGSLEGMNGIQKFQIHRDDRS 5108
            | .:::.:...|..||..|..||...|.:.|:|||..|:.||.||..|:....||      :...
  Fly  1022 YGGEFSPEHPSIVTFWEVLEGFDDMQRRQLLKFVTSCSRPPLLGFKDLDPPFFIQ------NTGD 1080

  Fly  5109 TDRLPCAHTCFNQLDLPMYKSYDKLRSCLLKAIHECSEGFGF 5150
            .:|||.|.||.|.|.||.:|:.:::|..||.||   ..|.||
  Fly  1081 MERLPTASTCTNLLKLPPFKTVEQMREKLLYAI---QSGAGF 1119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:428721
DUF913 621..989 CDD:461803
UBA_like_SF 1467..1506 CDD:473871
WWE 1756..1828 CDD:128922
DUF5585 3288..3672 CDD:465521
UBM 3670..3700 CDD:464159
UBM 3719..3746 CDD:464159
HECTc 4796..5149 CDD:238033 121/374 (32%)
CG3356NP_611896.1 HECTc 766..1120 CDD:238033 123/377 (33%)
Blue background indicates that the domain is not in the aligned region.

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