DRSC/TRiP Functional Genomics Resources

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Protein Alignment HUWE1 and Arel1

DIOPT Version :9

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:NP_001100214.1 Gene:Arel1 / 299197 RGDID:1307597 Length:823 Species:Rattus norvegicus


Alignment Length:592 Identity:172/592 - (29%)
Similarity:270/592 - (45%) Gaps:95/592 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  4613 EFAVLVLQPTVEAFFLIHASHRGASKKSGRSFMPNAAGFGLRAAAGAGAIGGLGAAAPSAQEYSP 4677
            ||.::||....:.....:.|..|.|... .:::.||..:.                  ||..:.|
  Rat   270 EFDIIVLSENEKNIVERNVSTSGVSIYF-EAYLYNANSYS------------------SAPWHLP 315

  Fly  4678 FMDDVSSANTPSSASFDDEPRMQDASTNTP-LVTNPS------TSTAMSAHEAQLRQDRQKFLQF 4735
            .|...||...||:| .::|.....:..:|| .|..|.      :....|..|..|:....:...|
  Rat   316 PMHMSSSQRRPSTA-LEEEEEDSPSECHTPEKVKKPKKVYCYVSPKQFSVKEFYLKIIPWRLYTF 379

  Fly  4736 AEKHRTVLNQILRQSPTH------LSDG---PFAVLVDHTRIL----------------DFDVKR 4775
            .....|..: .|...|.|      :.||   |..:......||                .|..|.
  Rat   380 RVCPGTKFS-YLGPDPVHKLLTLVVDDGIQPPVELSCKERNILAATFIRSLHKNIGGSETFQDKV 443

  Fly  4776 KYFQTELERLDEGIRREEHTVSVRRVTVFEDSFRVLYRLGPEEWKNRFYIVFEDEEGQDAGGLLR 4840
            .:||.||.::.......:.|:.|.|..:.|.|.:........:|...|.:||:|||..|.||..|
  Rat   444 NFFQRELRQVHMKRPHSKVTLKVSRHALLESSLKATRNFSISDWSKNFEVVFQDEEALDWGGPRR 508

  Fly  4841 EWYVIISREIFNPMYALFCVSPGDRVTYMINPSS--HANPN-----HLSYFKFVGRVIAKAVHDN 4898
            ||:.:|.:.:|:....||       ..:..|..:  |.|||     .|..::|.||::.|.::::
  Rat   509 EWFELICKALFDTTSQLF-------TRFSDNNQALVHPNPNRPAHLRLKMYEFAGRLVGKCLYES 566

  Fly  4899 KLLECY-------FTRSFYKHILGKQVKHTDMESQDYEFYKG-LDYLMKNDISTLGYELTFSTE- 4954
            .|...|       |||||...|:|.::.:...|:.|.||||. :.:::.||:|.:  ||.|:.| 
  Rat   567 SLGGAYKQLVRARFTRSFLAQIIGLRMHYKYFETDDPEFYKSKVCFILNNDMSEM--ELVFAEEK 629

  Fly  4955 VQEFG-VTQIRDLKPNGRDTAVTEENKFEYVQLVCQLKMSGSIRQQLDAFLEGFYDIIPKHLISI 5018
            ..:.| :.:|.:|...|..|.||..||..|:.|:.|.:::..::::::.||:|..:::|::|::|
  Rat   630 YNKSGQLDKIVELMTGGAQTPVTNANKTFYLNLLAQYRLASQVKEEVEHFLKGLNELVPENLLAI 694

  Fly  5019 FNEQELELLISGLPDIDIEDLKANT-----EYHKYTSKSAQIQWFWRALRSFDQADRAKFLQFVT 5078
            |:|.|||||:.|..||.:.|.||:.     .:|   .:...::|||..:.|..|.:.|:.|||.|
  Rat   695 FDENELELLMCGTGDISVSDFKAHAVVVGGSWH---FREKVMRWFWTVVSSLTQEELARLLQFTT 756

  Fly  5079 GTSKVPLQGFGSLEGMNGIQKFQ-IHRDDRSTDRLPCAHTCFNQLDLPMYKSYDKLRSCLLKAIH 5142
            |:|::|..||.:|     ...|| |.....||  ||.||||||||.||.|.||:::...|..||.
  Rat   757 GSSQLPPGGFAAL-----CPSFQIIAAPTHST--LPTAHTCFNQLCLPTYDSYEEVHRMLQLAIS 814

  Fly  5143 ECSEGFG 5149
            |..||||
  Rat   815 EGCEGFG 821

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:283630
DUF913 621..989 CDD:283642
UBA_like_SF 1467..1506 CDD:304366
WWE 1756..1828 CDD:128922
40S_SA_C 3575..3651 CDD:292740
DUF4414 3675..3779 CDD:291075
HECTc 4796..5149 CDD:238033 127/375 (34%)
HECTc 4820..5148 CDD:214523 121/350 (35%)
Arel1NP_001100214.1 Filamin 56..154 CDD:395505
HECTc 486..820 CDD:214523 122/352 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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