DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HUWE1 and Bag3

DIOPT Version :9

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:NP_001011936.1 Gene:Bag3 / 293524 RGDID:1307794 Length:574 Species:Rattus norvegicus


Alignment Length:639 Identity:138/639 - (21%)
Similarity:209/639 - (32%) Gaps:181/639 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  3196 QSTTPASGSNASATSSSTTSVVGTAAPTATSSIASGLLANAVSAGSGSSSLVVP----------- 3249
            |:..|....:.|.|::.....|....|..|:|.|:|        .|...|.::|           
  Rat    35 QTGWPFFVDHNSRTTTWNDPRVPPEGPKETASSANG--------PSRDGSRLLPAREGHPIYPQL 91

  Fly  3250 -----PVAASATGGTRRSSIPVLISSTLGPSSASSATSATGNGATSDATTTTGGPTRNFSSVDSN 3309
                 |:.....|...|.  |.|..:...|......|.|           ....|.|:.|.:...
  Rat    92 RPGYIPIPVHHEGSENRQ--PHLFHAYSQPGVQRFRTEA-----------AAAAPQRSQSPLRGG 143

  Fly  3310 VSSETQT-----------TTRPPRQRGGLRQQSQLPFNIYAEIDLTNEQDSEGDRSTSTTTGTAA 3363
            |:..|||           |.:||...|..|.||.      |..|.:         |:|::....:
  Rat   144 VTETTQTDKQCGQVPAAATAQPPTAHGPERSQSP------AASDCS---------SSSSSASLPS 193

  Fly  3364 DGAESQSQH---------------NSSSTAAQVAVPQHQR-HPPVPLLPSSGRPSRP---HTRLD 3409
            .|..|...|               |.:..|||.:..|.|: |  .|......:|.:|   ..:.|
  Rat   194 SGRSSLGSHQLPRGYIPIPVIHEQNITRPAAQPSFHQAQKTH--YPAQQGEYQPQQPVYHKIQGD 256

  Fly  3410 ETELLLLQLTDRQIRNRLQGSSGHTNSSRTSGSALINARPNRDLPACLQRHDHPAGSIFPRPSAN 3474
            :.|...|:.|. ..|:.::|:|....|...||:.:....|.| :...:.|         |:|..:
  Rat   257 DWEPRPLRATS-PFRSPVRGASSREGSPARSGTPVHCPSPIR-VHTVVDR---------PQPMTH 310

  Fly  3475 RTPAPTLVSMPTPMSNAALEQLNVTAPDVVRTDRNFALPSSLEVDVDVLPGIVDLPQQEAQPEDD 3539
            |.|.|.......|.|...|     ..||         ||          ||  .:|.|..:.|.|
  Rat   311 REPPPVTQPENKPESKPGL-----AGPD---------LP----------PG--HIPIQVIRREAD 349

  Fly  3540 QLLLPPPPPPPPS------DTTPLVHAEDDLWPGTVVSAGTREESSAPAVATESTEAVNESNQPE 3598
            ...:...||||..      .:.|:....    ||...||   ..||...||.|...|      |.
  Rat   350 SKPVSQKPPPPAEKVEVKVSSAPIPCPS----PGPAPSA---VPSSPKNVAAEPKAA------PS 401

  Fly  3599 PTP-ESSESTSPNPQAPSAEPTPLEPGAAVDASVGAQTPATTEEAASTAGASGTTATITDMSPEV 3662
            |.| |::...|.:.:||...|..|:..|.::...|.:......|...|   ......|.:...:.
  Rat   402 PAPAEAASLKSGDAEAPHKHPGVLKVEAILEKVQGLEQAVDNFEGKKT---DKKYLMIEEYLTKE 463

  Fly  3663 RAALGDLEVPEGVDPSFLAALPSEMREEVIQEHLRMQRIRQRAQQNAIQI-AHDSLVEVNPEFLA 3726
            ..||      :.|||...|.:....|:.|    .::|.|.::.:|.||.: ....:.|:.|.   
  Rat   464 LLAL------DSVDPEGRADVRQARRDGV----RKVQTILEKLEQKAIDVPGQVQVYELQPS--- 515

  Fly  3727 ALPLNIQSEVLMQQ-------------------RIEQQRQAAQTANPEDPVDTA 3761
                |::.|..:|:                   :.|.|:..|:.|.|.:|..||
  Rat   516 ----NLEPEQPLQEIMGAVAADKDKKGPENEDPQTESQQLEAKAATPPNPSSTA 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:283630
DUF913 621..989 CDD:283642
UBA_like_SF 1467..1506 CDD:304366
WWE 1756..1828 CDD:128922
40S_SA_C 3575..3651 CDD:292740 19/76 (25%)
DUF4414 3675..3779 CDD:291075 24/107 (22%)
HECTc 4796..5149 CDD:238033
HECTc 4820..5148 CDD:214523
Bag3NP_001011936.1 WW 23..55 CDD:197736 4/19 (21%)
BAG 423..500 CDD:214591 17/89 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.