DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HUWE1 and wwp-1

DIOPT Version :9

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:NP_740775.1 Gene:wwp-1 / 171647 WormBaseID:WBGene00007009 Length:794 Species:Caenorhabditis elegans


Alignment Length:627 Identity:196/627 - (31%)
Similarity:284/627 - (45%) Gaps:124/627 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  4631 ASHRGASKKSGRSFMPNAAGFGLRAAAGAGAIGGLGAAAPSAQEYSP--------------FMDD 4681
            ::.|.|:.|......|.:.     |||.|.|..| |..|..|:|..|              ::|.
 Worm   182 SARRPATAKRDTLAAPTST-----AAAAAAATAG-GTPAAGAEEQLPDGWEMRFDQYGRKYYVDH 240

  Fly  4682 VSSANT---------PSSASFDDEPRMQ----DASTNTPLVTNPSTSTAMSAHEAQLRQDRQKFL 4733
            .:.:.|         |.......:||.:    |.:|.|.....| |:..:.|||.......|..|
 Worm   241 TTKSTTWERPSTQPLPQGWEMRRDPRGRVYYVDHNTRTTTWQRP-TADMLEAHEQWQSGRDQAML 304

  Fly  4734 QFAEKHRTVLNQILRQSPTHLSDGPFAVLVD-HTRILDFDVKRKYFQTELERL-------DEGIR 4790
            |:.::       .|.|.....:|.|...|.: ..:..|.:..|.||...:.|.       .:|.|
 Worm   305 QWEQR-------FLLQQNNFSADDPLGPLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDPRTQGFR 362

  Fly  4791 REEH------------------------------------------------------------- 4794
            ..:.                                                             
 Worm   363 GSDQPLPDGWEMRFTEQGVPFFIDHQSKTTTYNDPRTGKPVGPLGVVGVQMAMEKSFRWKIAQFR 427

  Fly  4795 ------------TVSVRRVTVFEDSFRVLYRLGPEEWKNRFYIVFEDEEGQDAGGLLREWYVIIS 4847
                        .::|.|..||||||:.:.|....:.:.|.||.|..|||.|.||:.|||:.::|
 Worm   428 YLCLSNSVPNHVKITVSRNNVFEDSFQEIMRKNAVDLRRRLYIQFRGEEGLDYGGVAREWFFLLS 492

  Fly  4848 REIFNPMYALFCVSPGDRVTYMINPSSHANPNHLSYFKFVGRVIAKAVHDNKLLECYFTRSFYKH 4912
            .|:.||||.||..:..:..:..|||:|..||:||.||:::||.||.|:...|.:...||..|||.
 Worm   493 HEVLNPMYCLFMYAGNNNYSLQINPASFVNPDHLKYFEYIGRFIAMALFHGKFIYSGFTMPFYKK 557

  Fly  4913 ILGKQVKHTDMESQDYEFYKGLDYLMKNDISTLGYELTFSTEVQEFGVTQIRDLKPNGRDTAVTE 4977
            :|.|::...|:|..|.|.|..|.::..|:|.....||.|..:.:..|..:..:||..|.:.||||
 Worm   558 MLNKKIVLKDIEQVDSEIYNSLMWIKDNNIDECDMELYFVADYELLGELKTYELKEGGTEIAVTE 622

  Fly  4978 ENKFEYVQLVCQLKMSGSIRQQLDAFLEGFYDIIPKHLISIFNEQELELLISGLPDIDIEDLKAN 5042
            |||.||::|:.:.:.:..:.||..||..||..:.|...:..|:|:|||||:.|:.|:|::|.:.|
 Worm   623 ENKLEYIELLVEWRFNRGVEQQTKAFFTGFNSVFPLEWMQYFDERELELLLCGMQDVDVDDWQRN 687

  Fly  5043 TEYHKYTSKSAQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQGFGSLEGMNGIQKFQIHRDDR 5107
            |.|..|..:|.|:.|||:.:||.||..||:.|||||||.:||:.||..|.|..|.|.|.|.|..:
 Worm   688 TVYRHYAPQSKQVTWFWQWVRSLDQEKRARLLQFVTGTCRVPVGGFSELMGSTGPQLFCIERVGK 752

  Fly  5108 STDRLPCAHTCFNQLDLPMYKSYDKLRSCLLKAIHECSEGFG 5149
            . :.||.:|||||:||||.|:|||:|...|..|| |.:||||
 Worm   753 E-NWLPRSHTCFNRLDLPPYRSYDQLVEKLSMAI-EMTEGFG 792

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:283630
DUF913 621..989 CDD:283642
UBA_like_SF 1467..1506 CDD:304366
WWE 1756..1828 CDD:128922
40S_SA_C 3575..3651 CDD:292740
DUF4414 3675..3779 CDD:291075
HECTc 4796..5149 CDD:238033 151/352 (43%)
HECTc 4820..5148 CDD:214523 141/327 (43%)
wwp-1NP_740775.1 C2 29..147 CDD:301316
WW 221..250 CDD:278809 3/28 (11%)
WW 255..284 CDD:278809 6/28 (21%)
WW 325..357 CDD:197736 6/31 (19%)
WW 367..398 CDD:197736 0/30 (0%)
HECTc 440..792 CDD:238033 151/353 (43%)
HECTc 463..791 CDD:214523 141/329 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.