DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HUWE1 and smurf1

DIOPT Version :10

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:XP_002931540.1 Gene:smurf1 / 100491582 XenbaseID:XB-GENE-479046 Length:731 Species:Xenopus tropicalis


Alignment Length:455 Identity:184/455 - (40%)
Similarity:260/455 - (57%) Gaps:28/455 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly  4701 DASTNTPLVTNPSTSTAMSAHEAQLRQDRQKFLQFAEKHRTVLNQILRQSPTHLSDGPFAVLVDH 4765
            |.:..|...|:|.....:: |::||::..              |.|..||...|.:|.......:
 Frog   299 DHNNRTTQFTDPRLHHIIN-HQSQLKEPN--------------NAIPVQSDGSLEEGDEFPTQRY 348

  Fly  4766 TRILDFDVKRKYFQTELERLDEGIRREEH-TVSVRRVTVFEDSFRVLYRLGPEEWKNRFYIVFED 4829
            .|  |...|.|..:.||..|..   :..| .|.|.|..:||:|:|.:.::.|::.|.|..:.|..
 Frog   349 ER--DLVQKLKVLRHELSLLQP---QAGHCRVEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRG 408

  Fly  4830 EEGQDAGGLLREWYVIISREIFNPMYALFCVSPGDRVTYMINPSSHANPNHLSYFKFVGRVIAKA 4894
            |||.|.||:.|||..::..|:.||.|.||..|..:..|..|||.|..||:|||||.||||::..|
 Frog   409 EEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLA 473

  Fly  4895 VHDNKLLECYFTRSFYKHILGKQVKHTDMESQDYEFYKGLDYLMKNDISTLGYELTFSTEVQEFG 4959
            |.....:...||..|||.:|||.::.:|:||.|.|.:|.|.::::|||::: .:.||..|...||
 Frog   474 VFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITSV-LDHTFCVEHNAFG 537

  Fly  4960 VTQIRDLKPNGRDTAVTEENKFEYVQLVCQLKMSGSIRQQLDAFLEGFYDIIPKHLISIFNEQEL 5024
            .....:|||||::..||||||.|||:|....:....|..|..|..:||.::||:||:..|.::||
 Frog   538 RLLQHELKPNGKNLQVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFEQKEL 602

  Fly  5025 ELLISGLPDIDIEDLKANTEYHKYTSKSAQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQGFG 5089
            ||:|.||..|||.|.||||......:.|..:||||:|:.|||:..||:.||||||:::||||||.
 Frog   603 ELIIGGLDKIDISDWKANTRLKHCLANSNIVQWFWQAVESFDEERRARLLQFVTGSTRVPLQGFK 667

  Fly  5090 SLEGMNGI---QKFQIHRDDRSTDRLPCAHTCFNQLDLPMYKSYDKLRSCLLKAIHECSEGFGFA 5151
            :|:|..|.   :.|.||..|.:||.||.||||||::|:|.|:||:||...||.|:.|.|   |||
 Frog   668 ALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETS---GFA 729

  Fly  5152  5151
             Frog   730  729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:428721
DUF913 621..989 CDD:461803
UBA_like_SF 1467..1506 CDD:473871
WWE 1756..1828 CDD:128922
DUF5585 3288..3672 CDD:465521
UBM 3670..3700 CDD:464159
UBM 3719..3746 CDD:464159
HECTc 4796..5149 CDD:238033 160/355 (45%)
smurf1XP_002931540.1 C2_Smurf-like 14..138 CDD:176028
WW 234..266 CDD:197736
WW 280..312 CDD:197736 4/12 (33%)
HECTc 373..728 CDD:238033 160/358 (45%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.