DRSC/TRiP Functional Genomics Resources

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Protein Alignment HUWE1 and herc3

DIOPT Version :10

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:XP_002938676.3 Gene:herc3 / 100488790 XenbaseID:XB-GENE-968537 Length:1050 Species:Xenopus tropicalis


Alignment Length:435 Identity:112/435 - (25%)
Similarity:203/435 - (46%) Gaps:42/435 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly  4743 LNQI-LRQSPTHLSDGPFAVLVDHTRILDFDVKRKYFQTELE-------------------RLDE 4787
            ||:. |:..||.:.|.  ..|..:..:.|...|.|..||:.|                   .||.
 Frog   632 LNEAGLKLRPTIMQDS--ITLCSYPFVFDAQAKTKMLQTDAELQMQVAINGANLQNVFMLLTLDP 694

  Fly  4788 GIRREEHTV-SVRRVTVFEDSFRVLYRLGPEEWKNRFYIVFEDEEGQDAGGLLREWYVIISREIF 4851
            .:.:....| .|||.::..|:.|.|......:.|....::|:.||..|.||:.:|:::::.:|:.
 Frog   695 MLVKNPFLVLHVRRTSLVADALRELSIYSDIDLKKPLKVIFDGEEAVDDGGVTKEFFLLLLKELL 759

  Fly  4852 NPMYALFCVSPGDRVTYMINPSSHANPNHLSYFKFVGRVIAKAVHDNKLLECYFTRSFYKHILGK 4916
            ||:|.:|.|.....:.:.   |......| ::|..:|.:...|:::..:::.||..:.||.:|..
 Frog   760 NPIYGMFTVYQDSNLLWF---SDICFVEH-NWFHLIGIMCGLAIYNFTVVDLYFPLALYKKLLNV 820

  Fly  4917 QVKHTDME----SQDYEFYKGLDYLMKNDISTLGYELTFSTEVQEFGVTQIRDLKPNGRDTAVTE 4977
            |....|::    ::.....:.||| .::|:..: :.|.|:...:.:|:.:.|.|...|....||:
 Frog   821 QPTLEDLKELSPTEGRSLQELLDY-PEDDVDDV-FCLNFTICRESYGLAERRPLVAGGDHITVTK 883

  Fly  4978 ENKFEYVQLVCQLKMSGSIRQQLDAFLEGFYDIIPKHLISIFNEQELELLISGLPDIDIEDLKAN 5042
            :|:.::|........:.|:::..:||..||..:....::.:|...||..::.|..:.:.::|:.|
 Frog   884 DNRQQFVDAYVNYVFNQSVQEWYEAFSTGFLKVCGGKILELFQPSELRSMVVGSNNYNWQELEEN 948

  Fly  5043 TEYH-KYTSKSAQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQGFGSLEGMNGIQKFQIHRDD 5106
            ..|. .|::....::.||.....|....:.|||.|:||:.::|:.|..||       :..|....
 Frog   949 AIYKGDYSTAHPTVRMFWETFHDFPLEKKKKFLLFLTGSDRIPIYGMSSL-------RIIIQSIS 1006

  Fly  5107 RSTDRLPCAHTCFNQLDLPMYKSYDKLRSCLLKAIHECSEGFGFA 5151
            ...|.||.||||:|.||||.|.|.:.||..|.:|| :..|||..|
 Frog  1007 SGEDHLPVAHTCYNLLDLPKYSSKETLRRRLTQAI-DHYEGFSLA 1050

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:428721
DUF913 621..989 CDD:461803
UBA_like_SF 1467..1506 CDD:473871
WWE 1756..1828 CDD:128922
DUF5585 3288..3672 CDD:465521
UBM 3670..3700 CDD:464159
UBM 3719..3746 CDD:464159
HECTc 4796..5149 CDD:238033 95/358 (27%)
herc3XP_002938676.3 ATS1 3..334 CDD:444065
RCC1 313..377 CDD:395335
HECTc 702..1048 CDD:238033 95/359 (26%)
Blue background indicates that the domain is not in the aligned region.

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