DRSC/TRiP Functional Genomics Resources

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Protein Alignment HUWE1 and arel1

DIOPT Version :9

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:XP_002663081.2 Gene:arel1 / 100332031 ZFINID:ZDB-GENE-140106-259 Length:1020 Species:Danio rerio


Alignment Length:522 Identity:154/522 - (29%)
Similarity:256/522 - (49%) Gaps:91/522 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  4702 ASTNTPLVTNPSTSTAMSAHEA-------QLRQDRQKFLQFAEKHRTVLNQILRQSPTHL----- 4754
            ||:...|...||.......|::       ::|:.::.:...:.|..:|....|:..|..|     
Zfish   514 ASSQLALQRRPSMGEEEEEHDSPVEGQSEKIRKPKKVYCYISPKQFSVKEFYLKIIPWRLFTFRV 578

  Fly  4755 -------SDGPFAVLVDHTRILD----------------------------------FDVKRKYF 4778
                   ..||..|....|.::|                                  |..|..:|
Zfish   579 CPGTKFTYHGPDPVHKYLTLVVDDGIQPPVELSCKDRNIMAATFIRFLHKNIGGSETFQDKVNFF 643

  Fly  4779 QTELERLDEGIRREEHTVSVRRVTVFEDSFRVLYRLGPEEWKNRFYIVFEDEEGQDAGGLLREWY 4843
            |.||..:.....|.:.::.:.|.::.|.|.:........:|...|.:||:|||..|.||..|||:
Zfish   644 QRELRHIHSKRPRTKTSLKISRHSLLESSLKATRNFSVSDWSKNFEVVFQDEEALDWGGPRREWF 708

  Fly  4844 VIISREIF---NPMYALFCVSPGDRVTYMINPSSHANPNHL--SYFKFVGRVIAKAVHDN----- 4898
            .::.:.:|   |.::..|    .|....:::|::. .|.||  ..::|.|||:.|.::::     
Zfish   709 ELVCKALFDTNNQLFTRF----SDNNQGLVHPNAE-RPPHLRVKMYEFAGRVVGKCLYESALGGS 768

  Fly  4899 --KLLECYFTRSFYKHILGKQVKHTDMESQDYEFYK-GLDYLMKNDISTLGYELTFSTE-VQEFG 4959
              :|:...|||||...|:|.::.:...|:.|.|||| .:.:::.||:|.:  :|.|:.| ..:.|
Zfish   769 YKQLVRARFTRSFLAQIIGLRMNYKYFETDDEEFYKTKVCFILNNDVSEM--DLLFAEEKYSKSG 831

  Fly  4960 -VTQIRDLKPNGRDTAVTEENKFEYVQLVCQLKMSGSIRQQLDAFLEGFYDIIPKHLISIFNEQE 5023
             :.::.:|.|.|...|||.|||..|:.|:.|.:::..:|::::.||:|..:::|::|::||:|.|
Zfish   832 HLEKVVELIPGGAQIAVTNENKNHYLNLLAQYRLASQVREEVEHFLKGLNELVPENLLAIFDENE 896

  Fly  5024 LELLISGLPDIDIEDLKANT-----EYHKYTSKSAQIQWFWRALRSFDQADRAKFLQFVTGTSKV 5083
            ||||:.|..||:::|.||:.     .:|   .:...::|||..:.||.|.:.|:.|||.||:|::
Zfish   897 LELLMCGTGDINVQDFKAHAVIVGGSWH---FREKVMKWFWAVVSSFTQEELARLLQFTTGSSQL 958

  Fly  5084 PLQGFGSLEGMNGIQKFQ-IHRDDRSTDRLPCAHTCFNQLDLPMYKSYDKLRSCLLKAIHECSEG 5147
            |..||.:|     ...|| |.....||  ||.||||||||.||.|.||::|...|..||.|.|||
Zfish   959 PPGGFNTL-----CPSFQIIAAPTHST--LPTAHTCFNQLCLPTYDSYEELHKLLKLAISEGSEG 1016

  Fly  5148 FG 5149
            ||
Zfish  1017 FG 1018

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:283630
DUF913 621..989 CDD:283642
UBA_like_SF 1467..1506 CDD:304366
WWE 1756..1828 CDD:128922
40S_SA_C 3575..3651 CDD:292740
DUF4414 3675..3779 CDD:291075
HECTc 4796..5149 CDD:238033 128/373 (34%)
HECTc 4820..5148 CDD:214523 123/348 (35%)
arel1XP_002663081.2 SAM 29..89 CDD:197735
CobD_Cbib 167..>239 CDD:294379
Filamin 254..352 CDD:279024
HECTc 661..1018 CDD:238033 128/373 (34%)
HECTc 683..1017 CDD:214523 124/350 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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